Co-expression analysis

Gene ID ZmAffx.1361.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g10940: protein phosphatase-related (HF=7e-1)
Module size 20 genes
NF 0.47
%ile 58.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9399.30.98ZmAffx.1361.1.S1_at40794996-49--7e-1At3g10940protein phosphatase-relatedO.I.H.G.S.X.
0.8094.00.98Zm.17962.1.A1_atCK826755--6e+0At1g24600unknown proteinO.I.H.G.S.X.
0.7188.21.00ZmAffx.1535.1.S1_at40794996-15--0Atmg01275-O.I.H.G.S.X.
0.7188.20.99ZmAffx.180.1.S1_atAI668329--8e-1At1g17235RTFL11 (ROTUNDIFOLIA LIKE 11)O.I.H.G.S.X.
0.6886.10.99ZmAffx.1409.1.S1_at40794996-84--2e+0At4g15790unknown proteinO.I.H.G.S.X.
0.6785.81.00Zm.9233.1.A1_atBM348207pollen allergen Phl p 2-5e+0At5g55750hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.6077.81.00ZmAffx.146.1.A1_atAI66782630S ribosomal protein S31-2e-1At4g21450vesicle-associated membrane family protein / VAMP family proteinO.I.H.G.S.X.
0.5875.10.99ZmAffx.15.1.A1_atAI491598hypothetical protein LOC100279806 /// hypothetical protein LOC100280386-7e+0At5g09370protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.5674.41.00ZmAffx.1404.1.S1_at40794996-79--1e-3Atmg00690-O.I.H.G.S.X.
0.5369.10.99Zm.5158.1.S1_atAY106564.1hypothetical protein LOC100274429-3e-6At2g38560TFIIS (TRANSCRIPT ELONGATION FACTOR IIS)O.I.H.G.S.X.
0.4861.30.99ZmAffx.1498.1.S1_s_at40794996-115--9e-147Atcg01310-O.I.H.G.S.X.
0.4556.40.99ZmAffx.1347.1.S1_s_at40794996-41--2e+0At3g18050unknown proteinO.I.H.G.S.X.
0.4149.71.00ZmAffx.1459.1.S1_at11990232-26--6e-148Atcg00430-O.I.H.G.S.X.
0.3742.30.99ZmAffx.1402.1.S1_at40794996-77--3e+0At3g59680unknown proteinO.I.H.G.S.X.
0.3641.30.99ZmAffx.162.1.S1_atAI668180Hypothetical protein LOC100193115-2e-1At2g27240unknown proteinO.I.H.G.S.X.
0.3437.21.00ZmAffx.137.1.S1_atAI667708Hypothetical protein LOC100192022-8e-1At2g45130SPX3 (SPX DOMAIN GENE 3)O.I.H.G.S.X.
0.3233.40.99ZmAffx.1134.1.A1_atAW331087--8e-1At4g10270wound-responsive family proteinO.I.H.G.S.X.
0.3029.80.99ZmAffx.1438.1.S1_at11990232-4--7e-18Atcg00070-O.I.H.G.S.X.
0.3029.80.99ZmAffx.1344.1.S1_at40794996-152--9e+0Atmg00550-O.I.H.G.S.X.
0.2928.10.99ZmAffx.863.1.S1_atAI770721uracil phosphoribosyltransferase-1e+1Atcg01300-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.298.6GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.098.6GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.998.5GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.198.4GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.998.3GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.398.2GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.198.2GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.098.2GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.098.2GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.798.1GSM320458protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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