Co-expression analysis

Gene ID ZmAffx.1359.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g57290: 60S acidic ribosomal protein P3 (RPP3B) (HF=1e+1)
Module size 15 genes
NF 0.22
%ile 16.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5065.70.93ZmAffx.1359.1.S1_at40794996-47--1e+1At5g5729060S acidic ribosomal protein P3 (RPP3B)O.I.H.G.S.X.
0.4251.30.95Zm.11847.1.A1_atBM381224--3e+0At4g09320NDPK1O.I.H.G.S.X.
0.3538.90.97ZmAffx.910.1.A1_atAI770949Growth-regulating factor 13-like-3e+0At5g27910NF-YC8 (NUCLEAR FACTOR Y, SUBUNIT C8)O.I.H.G.S.X.
0.3336.00.95Zm.7878.1.A1_atCF018410hypothetical protein LOC100193558-2e+0At4g17565F-box family proteinO.I.H.G.S.X.
0.3336.00.95Zm.15528.1.S1_atCF021380NAC domain-containing protein 68-5e-12At2g36580pyruvate kinase, putativeO.I.H.G.S.X.
0.3029.80.95Zm.1426.1.S1_atCA400017--7e-35At2g06530VPS2.1O.I.H.G.S.X.
0.2521.30.95Zm.10457.1.A1_a_atCK348001cyclin-like F-box-1e-7At2g32560F-box family proteinO.I.H.G.S.X.
0.2318.60.95Zm.551.1.A1_atCF626259glutathione S-transferase GST 25-2e+0At1g78380ATGSTU19 (GLUTATHIONE S-TRANSFERASE TAU 19)O.I.H.G.S.X.
0.2318.60.96Zm.4758.1.A1_atAY111436.1hypothetical protein LOC100191606-6e-6At5g46750AGD9 (ARF-GAP DOMAIN 9)O.I.H.G.S.X.
0.2318.60.97Zm.13250.1.A1_atAJ005338.1Zea mays MADS14-3e-2At2g03710SEP4 (SEPALLATA 4)O.I.H.G.S.X.
0.2216.90.97Zm.9757.1.A1_atBM338070--5e-3At1g73150GTE3 (GLOBAL TRANSCRIPTION FACTOR GROUP E 3)O.I.H.G.S.X.
0.169.40.96Zm.12052.1.A1_atAI891193--1e-1At2g26140ftsh4 (FtsH protease 4)O.I.H.G.S.X.
0.115.30.94Zm.9925.1.A1_atBM348442--3e-1At2g40765unknown proteinO.I.H.G.S.X.
0.104.60.97Zm.8195.1.A1_atBM073245hypothetical protein LOC100273199-5e-1At3g51470protein phosphatase 2C, putative / PP2C, putativeO.I.H.G.S.X.
0.083.40.95Zm.13915.1.A1_atAF037028.1peroxidase R15-9e-3At3g11200AL2 (ALFIN-LIKE 2)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
18.199.2GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
17.999.2GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
17.399.1GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.798.9GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.998.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.598.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.298.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.198.7GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.898.7GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.298.4GSM320459protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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