Co-expression analysis

Gene ID ZmAffx.1357.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g26921: unknown protein (HF=2e-1)
Module size 6 genes
NF 0.90
%ile 99.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.98ZmAffx.1357.1.S1_at40794996-46--2e-1At1g26921unknown proteinO.I.H.G.S.X.
0.9199.00.98ZmAffx.1486.1.S1_at11990232-43--3e-56Atcg00650-O.I.H.G.S.X.
0.8395.60.98ZmAffx.1480.1.S1_at40794996-107--1e+1At5g1520040S ribosomal protein S9 (RPS9B)O.I.H.G.S.X.
0.8094.00.98ZmAffx.1538.1.S1_at40794996-128--3e+0At3g21730dihydroneopterin aldolase family proteinO.I.H.G.S.X.
0.7389.90.98ZmAffx.1501.1.S1_at40794996-118--8e-1At5g12300C2 domain-containing proteinO.I.H.G.S.X.
0.6785.80.98ZmAffx.1511.1.S1_at11990232-52--4e-48Atcg00740-O.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9299.20.96ZmAffx.1471.1.S1_at11990232-38--9e-89Atcg00580-O.I.H.G.S.X.
0.8395.60.98ZmAffx.1143.1.S1_atAW399931--8e+0At5g01340mitochondrial substrate carrier family proteinO.I.H.G.S.X.
0.8094.00.94ZmAffx.1516.1.S1_s_at11990232-108large ribosomal protein 2-0Atcg01310-O.I.H.G.S.X.
0.8094.00.95ZmAffx.1356.1.S1_at40794996-158--3e+0At5g5795026S proteasome regulatory subunit, putativeO.I.H.G.S.X.
0.7792.10.93ZmAffx.1487.1.S1_at11990232-44--8e-13Atcg00660-O.I.H.G.S.X.
0.7792.10.96ZmAffx.1319.1.S1_at40794996-32--4e-2At4g11880AGL14 (agamous-like 14)O.I.H.G.S.X.
0.7188.20.96ZmAffx.766.1.S1_atAI746089Hypothetical protein LOC100191384-3e+0At3g12320unknown proteinO.I.H.G.S.X.
0.6381.10.94ZmAffx.171.1.S1_atAI668231Hypothetical protein LOC100192595-3e+0At1g51160synbindin, putativeO.I.H.G.S.X.
0.6381.10.96ZmAffx.1125.1.A1_atAW288880--3e+0At5g57520ZFP2 (ZINC FINGER PROTEIN 2)O.I.H.G.S.X.
0.6077.80.90ZmAffx.1525.1.S1_at40794996-122--2e+0At3g30160unknown proteinO.I.H.G.S.X.
0.6077.80.95ZmAffx.706.1.S1_atAI738209--8e-1At1g23590unknown proteinO.I.H.G.S.X.
0.5571.60.94ZmAffx.1475.1.S1_at40794996-102--6e-1At2g45010unknown proteinO.I.H.G.S.X.
0.5571.60.96ZmAffx.1536.1.S1_at40794996-127--1e+1At3g61390U-box domain-containing proteinO.I.H.G.S.X.
0.4861.30.95ZmAffx.1479.1.S1_at40794996-106--0At2g07727cytochrome b (MTCYB) (COB) (CYTB)O.I.H.G.S.X.
0.4658.40.92ZmAffx.1519.1.S1_at11990232-56--3e-25Atcg00770-O.I.H.G.S.X.
0.4658.40.93ZmAffx.169.1.S1_atAI664986--2e-1At2g24765ARF3 (ADP-RIBOSYLATION FACTOR 3)O.I.H.G.S.X.
0.4455.70.86ZmAffx.16.1.A1_atAI491648--5e+0At2g02730-O.I.H.G.S.X.
0.4251.30.94ZmAffx.1542.1.S1_at40794996-19--1e+0At1g80690unknown proteinO.I.H.G.S.X.
0.3945.60.85ZmAffx.168.1.S1_a_atAI668216--2e-1At3g24250glycine-rich proteinO.I.H.G.S.X.
0.3945.60.89ZmAffx.17.1.A1_atAI491699--1e+1At2g16535-O.I.H.G.S.X.
0.3945.60.91ZmAffx.170.1.S1_atAI668224--8e-1At1g13245RTFL17 (ROTUNDIFOLIA LIKE 17)O.I.H.G.S.X.
0.3945.60.94ZmAffx.1478.1.S1_at40794996-105--1e+1At5g26673-O.I.H.G.S.X.
0.3641.30.93ZmAffx.166.1.A1_atAI668207hypothetical protein LOC100279427-1e+1At5g57370unknown proteinO.I.H.G.S.X.
0.3336.00.92ZmAffx.1517.1.S1_at11990232-55--2e+0At4g11175translation initiation factor IF-1, chloroplast, putativeO.I.H.G.S.X.
0.3336.00.92ZmAffx.150.1.S1_atAI667840Hypothetical protein LOC100193164-1e+1At5g52605-O.I.H.G.S.X.
0.2828.10.90ZmAffx.1513.1.S1_at11990232-53--3e-25Atcg00750-O.I.H.G.S.X.
0.2622.70.89ZmAffx.156.1.S1_atAI668123--3e+0At2g35345unknown proteinO.I.H.G.S.X.
0.2622.70.89ZmAffx.1394.1.S1_at40794996-69--2e-1At5g46013unknown proteinO.I.H.G.S.X.


Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
16.999.1GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.899.1GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.699.1GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.299.0GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.199.0GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.899.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.599.0GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.998.9GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.998.9GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.598.4GSM320459protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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