Co-expression analysis

Gene ID ZmAffx.1318.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At2g18660: EXLB3 (EXPANSIN-LIKE B3 PRECURSOR) (HF=3e+0)
Module size 14 genes
NF 0.64
%ile 86.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5674.40.81ZmAffx.1318.1.S1_at40794996-144--3e+0At2g18660EXLB3 (EXPANSIN-LIKE B3 PRECURSOR)O.I.H.G.S.X.
0.8696.30.91ZmAffx.808.1.S1_atAI770390hypothetical protein LOC100279421-8e-4At2g40070-O.I.H.G.S.X.
0.8395.60.90ZmAffx.1502.1.S1_at40794996-119--0Atmg01360-O.I.H.G.S.X.
0.7188.20.93ZmAffx.1519.1.S1_s_at11990232-56--3e-25Atcg00770-O.I.H.G.S.X.
0.7188.20.90ZmAffx.1392.1.S1_at40794996-67--0Atmg00513-O.I.H.G.S.X.
0.6986.50.90ZmAffx.1391.1.S1_at40794996-66--6e-1At5g16360NC domain-containing proteinO.I.H.G.S.X.
0.6785.80.91ZmAffx.163.1.S1_atAI668189--8e-1At5g55240caleosin-related family protein / embryo-specific protein, putativeO.I.H.G.S.X.
0.6785.80.93ZmAffx.1477.1.S1_at40794996-104--9e+0At5g56100glycine-rich protein / oleosinO.I.H.G.S.X.
0.6785.80.95ZmAffx.14.1.S1_atAF536189.1--1e-8Atmg01080-O.I.H.G.S.X.
0.6481.70.95ZmAffx.166.1.S1_atAI668207--1e+1At5g57370unknown proteinO.I.H.G.S.X.
0.6381.10.90ZmAffx.154.1.S1_atAI668116--3e+0At5g24655LSU4 (RESPONSE TO LOW SULFUR 4)O.I.H.G.S.X.
0.5976.10.90ZmAffx.1395.1.S1_at40794996-70--2e-1At1g80700unknown proteinO.I.H.G.S.X.
0.4961.90.89ZmAffx.168.1.S1_atAI668216--2e-1At3g24250glycine-rich proteinO.I.H.G.S.X.
0.3336.00.88ZmAffx.170.1.S1_atAI668224--8e-1At1g13245RTFL17 (ROTUNDIFOLIA LIKE 17)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
23.599.5GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
21.699.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
20.799.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
20.399.3GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
20.099.3GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
19.699.3GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
19.699.3GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
18.499.2GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
17.799.1GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.398.4GSM320460protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



Back to the CoP portal site

Back to the KAGIANA project homepage