Co-expression analysis

Gene ID ZmAffx.1200.1.S1_at
Gene name hypothetical protein LOC100191370
Homology with ArabidopsisSimilar to At5g11630: unknown protein (HF=4e+0)
Module size 12 genes
NF 0.37
%ile 39.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7691.10.99ZmAffx.1200.1.S1_atBE128804hypothetical protein LOC100191370-4e+0At5g11630unknown proteinO.I.H.G.S.X.
0.6481.70.99Zm.7750.3.S1_atAY105255.1--3e-35At5g62690TUB2O.I.H.G.S.X.
0.4556.40.99ZmAffx.151.1.S1_atAI667841--2e-10At1g50140ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide bindingO.I.H.G.S.X.
0.4455.71.00Zm.13588.1.A1_atAY107800.1--1e+0At4g3467040S ribosomal protein S3A (RPS3aB)O.I.H.G.S.X.
0.3844.20.99Zm.12750.2.A1_x_atCD446742--5e-38At2g21410VHA-A2 (VACUOLAR PROTON ATPASE A2)O.I.H.G.S.X.
0.3844.20.99Zm.7016.1.A1_atAY103859.1--3e-1At5g44610MAP18 (Microtubule-associated Protein 18)O.I.H.G.S.X.
0.3233.40.99Zm.6275.1.S1_a_atAF540907.1benzoxazin6-7e-1At1g066402-oxoglutarate-dependent dioxygenase, putativeO.I.H.G.S.X.
0.2928.10.99ZmAffx.475.1.A1_atAI677510--2e-1At1g74210glycerophosphoryl diester phosphodiesterase family proteinO.I.H.G.S.X.
0.2828.10.99Zm.10507.1.S1_atCA827194--9e-6At5g53905unknown proteinO.I.H.G.S.X.
0.2828.10.99ZmAffx.976.1.A1_atAI833931--1e-2At4g23880unknown proteinO.I.H.G.S.X.
0.169.40.99Zm.9940.1.A1_atBM339055--3e-2At5g26860LON1 (LON PROTEASE 1)O.I.H.G.S.X.
0.147.70.99Zm.1094.1.A1_atBM339500--2e-5At5g26210AL4 (ALFIN-LIKE 4)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
19.799.3GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
18.699.2GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
17.599.1GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.099.0GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.798.9GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.098.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.198.6GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.198.6GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.598.3GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.492.2GSM206325Upper pulvinus 5 min polysomal RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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