Co-expression analysis

Gene ID	ZmAffx.1194.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At5g59990: - (HF=4e+0)
Module size	6 genes
NF	0.45
%ile	54.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	85.8	0.99	ZmAffx.1194.1.A1_at	BE025369	-	-	4e+0	At5g59990	-	O.I.	H.G.	S.X.	Please select
0.63	81.1	0.99	ZmAffx.742.1.S1_at	AI740139	-	-	3e+0	At1g10650	protein binding / zinc ion binding	O.I.	H.G.	S.X.	Please select
0.46	58.4	0.99	ZmAffx.559.1.A1_at	AI714543	-	-	3e+0	At5g48970	mitochondrial substrate carrier family protein	O.I.	H.G.	S.X.	Please select
0.38	44.2	0.99	ZmAffx.894.1.A1_at	AI770873	-	-	8e-1	At5g62300	40S ribosomal protein S20 (RPS20C)	O.I.	H.G.	S.X.	Please select
0.26	22.7	0.99	ZmAffx.20.1.S1_at	AI600385	-	-	3e+0	At4g02550	unknown protein	O.I.	H.G.	S.X.	Please select
0.25	21.3	0.99	Zm.2102.1.A1_at	AW267527	hypothetical protein LOC100274069	-	3e-3	At2g32080	PUR ALPHA-1	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
21.9	99.4	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.9	99.3	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.7	99.3	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.6	99.0	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.4	98.8	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.7	98.6	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.9	98.3	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.6	98.3	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.7	98.1	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.6	96.4	GSM320463	protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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