Co-expression analysis

Gene ID ZmAffx.1176.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At3g18250: unknown protein (HF=8e-1)
Module size 23 genes
NF 0.30
%ile 27.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9097.00.96ZmAffx.1176.1.A1_atAW927389--8e-1At3g18250unknown proteinO.I.H.G.S.X.
0.4455.70.98Zm.13632.1.A1_atCO532913hypothetical protein LOC100191724-5e+0At5g20400oxidoreductase, 2OG-Fe(II) oxygenase family proteinO.I.H.G.S.X.
0.4251.30.99Zm.11586.1.A1_atBM379136--6e+0Atmg00280-O.I.H.G.S.X.
0.3844.20.99Zm.13456.2.A1_atAY111230.1Hypothetical protein LOC100194201-5e+0At3g50520phosphoglycerate/bisphosphoglycerate mutase family proteinO.I.H.G.S.X.
0.3641.30.99Zm.3964.1.A1_a_atAF205603.1ferric-chelate reductase (NADH)2-1e-17At5g17770ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)O.I.H.G.S.X.
0.3641.30.98Zm.4510.3.S1_atAI734509hypothetical protein LOC100193304-2e-1At5g24879unknown proteinO.I.H.G.S.X.
0.3538.90.98Zm.6147.2.S1_atCD942228--4e-24At3g51800ATG2O.I.H.G.S.X.
0.3336.00.98Zm.10593.1.A1_atBM380000hypothetical protein LOC100194168-1e+0At3g55350unknown proteinO.I.H.G.S.X.
0.3336.00.97Zm.15761.1.S1_atCD445921--1e-17At1g10520DNA polymerase lambda (POLL)O.I.H.G.S.X.
0.3131.60.98Zm.17625.1.A1_atCF631845--4e-23At1g10200WLIM1O.I.H.G.S.X.
0.3029.80.99Zm.12454.1.A1_atCF629114hypothetical protein LOC100273736-6e-3At1g10640polygalacturonaseO.I.H.G.S.X.
0.2928.10.97Zm.4109.1.A1_atCD441071NADP-dependent D-sorbitol-6-phosphate dehydrogenase /// NADP-dependent D-sorbitol-6-phosphate dehydrogenase-7e-38At2g21250mannose 6-phosphate reductase (NADPH-dependent), putativeO.I.H.G.S.X.
0.2828.10.99ZmAffx.533.1.S1_atAI711769--8e-1At5g11790Ndr family proteinO.I.H.G.S.X.
0.2724.60.98Zm.13982.1.S1_atAY104726.1hypothetical protein LOC100272291-2e-17At2g25840OVA4 (ovule abortion 4)O.I.H.G.S.X.
0.2622.70.98Zm.16763.2.S1_a_atBE051683hypothetical protein LOC100193074-1e-1At5g41570WRKY24O.I.H.G.S.X.
0.2521.30.98Zm.16279.1.A1_atCD434227--5e-1At4g25150acid phosphatase, putativeO.I.H.G.S.X.
0.2419.80.97Zm.17950.1.A1_atCK827767--3e-1At2g03310unknown proteinO.I.H.G.S.X.
0.2318.60.97Zm.5578.4.S1_atAI677290Hypothetical protein LOC100193656-4e+0At1g34910unknown proteinO.I.H.G.S.X.
0.2318.60.99ZmAffx.1031.1.S1_atAI881675--2e-1At2g24490RPA2 (REPLICON PROTEIN A2)O.I.H.G.S.X.
0.2318.60.98Zm.15979.1.A1_atAW091403hypothetical protein LOC100277589-8e-2At3g10750-O.I.H.G.S.X.
0.1710.60.97ZmAffx.95.1.S1_atAI665406--8e-1At1g43160RAP2.6 (related to AP2 6)O.I.H.G.S.X.
0.169.40.98ZmAffx.1219.1.S1_s_at40794996-166--2e-1At1g13760unknown proteinO.I.H.G.S.X.
0.169.40.98ZmAffx.867.1.S1_atAI770735protein binding protein-3e+0At5g23420HMGB6O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
22.999.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
22.299.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
21.599.4GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
20.599.3GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
18.399.2GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
17.399.1GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
17.299.1GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.499.0GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.099.0GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.995.7GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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