Co-expression analysis

Gene ID ZmAffx.1168.1.S1_s_at
Gene name early fruit mRNA
Homology with ArabidopsisSimilar to At5g16380: unknown protein (HF=2e-1)
Module size 10 genes
NF 0.80
%ile 97.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7087.00.92ZmAffx.1168.1.S1_s_atAW600602early fruit mRNA-2e-1At5g16380unknown proteinO.I.H.G.S.X.
0.8996.80.95RPTR-Zm-ECOLOXL_x_atRPTR-Zm-ECOLOXL---O.I.H.G.S.X.
0.8495.80.96RPTR-Zm-J01347-1_s_atRPTR-Zm-J01347-1---O.I.H.G.S.X.
0.8094.00.93ZmAffx.782.1.S1_atAI759014--8e-1At2g46455-O.I.H.G.S.X.
0.8094.00.94RPTR-Zm-J01347-1_atRPTR-Zm-J01347-1---O.I.H.G.S.X.
0.8094.00.95RPTR-Zm-J01347-3_atRPTR-Zm-J01347-3---O.I.H.G.S.X.
0.7892.50.95RPTR-Zm-ECOLOXB_x_atRPTR-Zm-ECOLOXB---O.I.H.G.S.X.
0.7590.80.97RPTR-Zm-J01347-2_atRPTR-Zm-J01347-2---O.I.H.G.S.X.
0.7590.80.98RPTR-Zm-ECOLOXL_atRPTR-Zm-ECOLOXL---O.I.H.G.S.X.
0.5065.70.95ZmAffx.740.1.A1_atAI740113hypothetical protein LOC100192706-3e+0At3g53630unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.998.9GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.298.8GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.998.8GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.898.7GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.698.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.098.6GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.998.6GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.398.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.898.5GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.094.0GSM202408Zmet2 study 11-day seedling aerial tissue genotype B73 Rep6GSE8188Expression profiling of zmet2-m1 mutants relative to wild-typeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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