Co-expression analysis

Gene ID ZmAffx.1162.1.S1_at
Gene name hypothetical protein LOC100278489
Homology with ArabidopsisSimilar to At4g34920: 1-phosphatidylinositol phosphodiesterase-related (HF=2e-1)
Module size 16 genes
NF 0.44
%ile 52.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8595.90.98ZmAffx.1162.1.S1_atAW447878hypothetical protein LOC100278489-2e-1At4g349201-phosphatidylinositol phosphodiesterase-relatedO.I.H.G.S.X.
0.5571.60.98--O.I.H.G.S.X.
0.5369.10.99Zm.12162.2.S1_a_atBM498680SEC13-related protein /// SEC13-related protein-2e-4At2g30050transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.4759.90.99Zm.4359.2.A1_x_atAI795776EMB2756-2e+0At5g52160protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.4759.90.99ZmAffx.734.1.A1_atAI740044--1e+1At5g01670aldose reductase, putativeO.I.H.G.S.X.
0.4658.40.98Zm.8734.1.A1_atCA403611hypothetical protein LOC100275773-3e-16At2g42230tubulin-specific chaperone C-relatedO.I.H.G.S.X.
0.4455.70.99Zm.14107.2.A1_atAI770963--8e-1At3g56880VQ motif-containing proteinO.I.H.G.S.X.
0.4352.80.99Zm.5848.1.S1_atCO529387phosphoglycerate mutase gpmB-6e-1At5g62320ATMYB99 (MYB DOMAIN PROTEIN 99)O.I.H.G.S.X.
0.4352.80.99Zm.14784.1.A1_atBG841481--3e+0At3g01175-O.I.H.G.S.X.
0.4149.70.98Zm.7645.1.A1_atBM379053--5e+0At5g46300unknown proteinO.I.H.G.S.X.
0.3742.30.99Zm.13162.1.A1_atCO521967--9e-3At3g02040SRG3 (senescence-related gene 3)O.I.H.G.S.X.
0.3641.30.98Zm.10053.1.A1_atCO523900programmed cell death protein 5-1e-4At1g29850double-stranded DNA-binding family proteinO.I.H.G.S.X.
0.3538.90.99ZmAffx.913.1.A1_atAI770960--8e-1At4g20460NAD-dependent epimerase/dehydratase family proteinO.I.H.G.S.X.
0.3336.00.99ZmAffx.566.1.A1_atAI714636--2e-1At5g05610AL1 (ALFIN-LIKE 1)O.I.H.G.S.X.
0.3131.60.99ZmAffx.459.1.S1_atAI677212--8e-1At1g2691060S ribosomal protein L10 (RPL10B)O.I.H.G.S.X.
0.3029.80.99ZmAffx.71.1.S1_atAI665169--3e+0At1g50640ERF3 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 3)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
18.999.2GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.499.0GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.298.9GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.698.9GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.098.7GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.998.7GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.398.7GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.998.6GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.298.5GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.297.4GSM253282ZM_8d_SG200_3Alu_IIIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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