Co-expression analysis

Gene ID	ZmAffx.1147.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At5g64667: IDL2 (INFLORESCENCE DEFICIENT IN ABSCISSION (IDA)-LIKE 2) (HF=6e-1)
Module size	8 genes
NF	0.34
%ile	33.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.93	99.3	0.95	ZmAffx.1147.1.A1_at	AW400224	-	-	6e-1	At5g64667	IDL2 (INFLORESCENCE DEFICIENT IN ABSCISSION (IDA)-LIKE 2)	O.I.	H.G.	S.X.	Please select
0.36	41.3	0.98	ZmAffx.783.1.A1_s_at	AI745854	nucleolin	-	8e-7	At1g51730	RWD domain-containing protein	O.I.	H.G.	S.X.	Please select
0.30	29.8	0.97	ZmAffx.1484.1.S1_at	11990232-41	-	-	1e-21	Atcg00630	-	O.I.	H.G.	S.X.	Please select
0.27	24.6	0.97	ZmAffx.1308.1.S1_s_at	11990232-76	-	-	2e+0	At5g13780	GCN5-related N-acetyltransferase, putative	O.I.	H.G.	S.X.	Please select
0.27	24.6	0.98	RPTR-Zm-K01193-1_at	RPTR-Zm-K01193-1	-	-			-	O.I.	H.G.	S.X.	Please select
0.25	21.3	0.97	ZmAffx.1184.1.A1_at	AW927978	-	-	1e-2	At2g38640	unknown protein	O.I.	H.G.	S.X.	Please select
0.22	16.9	0.98	ZmAffx.767.1.A1_at	AI746090	hypothetical protein LOC100273842	-	3e+0	At4g18090	unknown protein	O.I.	H.G.	S.X.	Please select
0.21	15.5	0.97	ZmAffx.1523.1.S1_at	40794996-120	-	-	4e-9	Atmg01080	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
13.9	98.8	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.9	98.8	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.7	98.8	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.0	98.4	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.8	98.3	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.2	98.2	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.1	98.2	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.6	98.1	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.0	98.0	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.4	92.2	GSM320464	protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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