Co-expression analysis

Gene ID ZmAffx.1145.1.S1_at
Gene name hypothetical protein LOC100278076
Homology with ArabidopsisSimilar to At1g67570: unknown protein (HF=1e-2)
Module size 14 genes
NF 0.17
%ile 11.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7792.10.98ZmAffx.1145.1.S1_atAW400072hypothetical protein LOC100278076-1e-2At1g67570unknown proteinO.I.H.G.S.X.
0.3844.20.99Zm.2313.1.S1_atCF625540--4e-1At1g31160zinc-binding protein, putative / protein kinase C inhibitor, putativeO.I.H.G.S.X.
0.3641.30.99Zm.9346.1.A1_atBM339075--6e+0At2g34825RALFL20 (RALF-LIKE 20)O.I.H.G.S.X.
0.2521.30.99Zm.10078.1.A1_atAY105378.1--9e-2At3g58350meprin and TRAF homology domain-containing protein / MATH domain-containing proteinO.I.H.G.S.X.
0.2014.20.99Zm.10778.2.A1_atBQ539551--3e-6At2g22475GEM (GL2-EXPRESSION MODULATOR)O.I.H.G.S.X.
0.2014.20.99Zm.9157.1.A1_atCB351321molybdenum cofactor synthesis protein 2 large subunit-7e+0At1g50760unknown proteinO.I.H.G.S.X.
0.1811.60.99ZmAffx.896.1.A1_atAI770881--3e+0At5g57620MYB36 (myb domain protein 36)O.I.H.G.S.X.
0.1811.60.99Zm.33.1.S1_x_atM12144.1alpha zein 19kDa D2-7e-1At1g18265unknown proteinO.I.H.G.S.X.
0.158.60.99Zm.1089.1.A1_atCF628396hypothetical protein LOC100280051-7e+0At5g42850-O.I.H.G.S.X.
0.147.70.99Zm.8181.1.A1_atBE643624hypothetical protein LOC100193608-2e-1At1g043502-oxoglutarate-dependent dioxygenase, putativeO.I.H.G.S.X.
0.125.90.99ZmAffx.796.1.S1_atAI770343--3e+0At5g47600heat shock protein-relatedO.I.H.G.S.X.
0.125.90.99Zm.13465.1.A1_atAY109099.1hypothetical protein LOC100274229-3e+0At5g25460unknown proteinO.I.H.G.S.X.
0.104.60.99Zm.6069.1.A1_a_atAY104047.1--1e-17At2g4184040S ribosomal protein S2 (RPS2C)O.I.H.G.S.X.
0.083.40.99Zm.10674.1.A1_atBM380580hypothetical protein LOC100194243-1e+0At4g25720QC (GLUTAMINYL CYCLASE)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
19.599.3GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.999.0GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.998.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.498.8GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.498.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.498.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.898.6GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.198.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.598.4GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.695.2GSM320461protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



Back to the CoP portal site

Back to the KAGIANA project homepage