Co-expression analysis

Gene ID ZmAffx.1145.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At1g67570: unknown protein (HF=1e-2)
Module size 6 genes
NF 0.03
%ile 1.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5674.40.67ZmAffx.1145.1.A1_atAW400072--1e-2At1g67570unknown proteinO.I.H.G.S.X.
0.147.70.86Zm.16593.1.A1_a_atCF629794hypothetical protein LOC100192949-5e-20At5g6117040S ribosomal protein S19 (RPS19C)O.I.H.G.S.X.
0.125.90.88Zm.12888.1.A1_atAY106765.1hypothetical protein LOC100191869-9e-2At3g52280GTE6 (GENERAL TRANSCRIPTION FACTOR GROUP E6)O.I.H.G.S.X.
0.062.30.86Zm.12136.1.A1_atAY109005.1hypothetical protein LOC100276353-5e-1At2g28790osmotin-like protein, putativeO.I.H.G.S.X.
0.020.70.68Zm.18365.1.A1_atCF626505--1e-3At1g13750calcineurin-like phosphoesterase family proteinO.I.H.G.S.X.
0.010.30.67ZmAffx.625.1.S1_atAI715053--1e+1At5g13340unknown proteinO.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.5065.70.87ZmAffx.406.11.A1_atAI676834--3e+0At1g57630disease resistance protein (TIR class), putativeO.I.H.G.S.X.
0.2216.90.85Zm.6227.1.S1_atAF272759.1kinesin-like protein15-3e-23At3g51150kinesin motor family proteinO.I.H.G.S.X.
0.2115.50.89Zm.16994.1.A1_atAI649902Methionine synthase-7e-163At5g17920ATMS1O.I.H.G.S.X.
0.169.40.86Zm.12865.1.A1_atCD959843hypothetical protein LOC100194037-2e+0At4g25780pathogenesis-related protein, putativeO.I.H.G.S.X.
0.147.70.85Zm.15086.1.S2_atCF037152Histone H4-5e-18At3g53730histone H4O.I.H.G.S.X.
0.136.80.66Zm.8680.1.A1_atBM075162hypothetical protein LOC100277231-1e-3At1g70760CRR23 ((chlororespiratory reduction 23)O.I.H.G.S.X.
0.125.90.74Zm.15229.1.A1_atCF625786--5e-22At3g51850CPK13O.I.H.G.S.X.
0.125.90.88Zm.4151.1.A1_atCK145163hypothetical protein LOC100276753-5e-4At4g31410unknown proteinO.I.H.G.S.X.


Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.798.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.498.9GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.898.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.498.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.898.7GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.798.7GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.698.7GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.198.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.498.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.194.3GSM320466protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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