Co-expression analysis

Gene ID ZmAffx.1145.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At1g67570: unknown protein (HF=1e-2)
Module size 6 genes
NF 0.03
%ile 1.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5674.40.67ZmAffx.1145.1.A1_atAW400072--1e-2At1g67570unknown proteinO.I.H.G.S.X.
0.147.70.86Zm.16593.1.A1_a_atCF629794hypothetical protein LOC100192949-5e-20At5g6117040S ribosomal protein S19 (RPS19C)O.I.H.G.S.X.
0.125.90.88Zm.12888.1.A1_atAY106765.1hypothetical protein LOC100191869-9e-2At3g52280GTE6 (GENERAL TRANSCRIPTION FACTOR GROUP E6)O.I.H.G.S.X.
0.062.30.86Zm.12136.1.A1_atAY109005.1hypothetical protein LOC100276353-5e-1At2g28790osmotin-like protein, putativeO.I.H.G.S.X.
0.020.70.68Zm.18365.1.A1_atCF626505--1e-3At1g13750calcineurin-like phosphoesterase family proteinO.I.H.G.S.X.
0.010.30.67ZmAffx.625.1.S1_atAI715053--1e+1At5g13340unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.798.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.498.9GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.898.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.498.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.898.7GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.798.7GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.698.7GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.198.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.498.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.194.3GSM320466protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the Arabidopsis gene, At1g67570, orthologous to the query gene, ZmAffx.1145.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.O.I.H.G.S.X.Other DB
0.4050.8At1g67570843078unknown proteinF:unknown;P:unknown;C:nucleus;POO.I.H.G.S.X.
0.6781.6At5g07720830665galactosyl transferase GMA12/MNN10 family proteinF:transferase activity, transferring glycosyl groups, transferase activity;P:biological_process unknown;C:integral to membrane;PFOO.I.H.G.S.X.
0.2014.4At1g67410843061exostosin family proteinF:catalytic activity;P:biological_process unknown;C:endomembrane system, membrane;PMOBFO.I.H.G.S.X.
0.1811.4At1g71940843525-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOMPFAO.I.H.G.S.X.
0.135.8At5g59740836095UDP-galactose/UDP-glucose transporter-relatedF:galactose transmembrane transporter activity;P:unknown;C:unknown;MFPOBO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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