Co-expression analysis

Gene ID	ZmAffx.1145.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At1g67570: unknown protein (HF=1e-2)
Module size	6 genes
NF	0.03
%ile	1.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.56	74.4	0.67	ZmAffx.1145.1.A1_at	AW400072	-	-	1e-2	At1g67570	unknown protein	O.I.	H.G.	S.X.	Please select
0.14	7.7	0.86	Zm.16593.1.A1_a_at	CF629794	hypothetical protein LOC100192949	-	5e-20	At5g61170	40S ribosomal protein S19 (RPS19C)	O.I.	H.G.	S.X.	Please select
0.12	5.9	0.88	Zm.12888.1.A1_at	AY106765.1	hypothetical protein LOC100191869	-	9e-2	At3g52280	GTE6 (GENERAL TRANSCRIPTION FACTOR GROUP E6)	O.I.	H.G.	S.X.	Please select
0.06	2.3	0.86	Zm.12136.1.A1_at	AY109005.1	hypothetical protein LOC100276353	-	5e-1	At2g28790	osmotin-like protein, putative	O.I.	H.G.	S.X.	Please select
0.02	0.7	0.68	Zm.18365.1.A1_at	CF626505	-	-	1e-3	At1g13750	calcineurin-like phosphoesterase family protein	O.I.	H.G.	S.X.	Please select
0.01	0.3	0.67	ZmAffx.625.1.S1_at	AI715053	-	-	1e+1	At5g13340	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
14.7	98.9	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.4	98.9	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.8	98.8	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.4	98.8	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.8	98.7	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.7	98.7	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.6	98.7	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.1	98.5	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.4	98.4	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.1	94.3	GSM320466	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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