Co-expression analysis

Gene ID ZmAffx.1135.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At4g08670: protease inhibitor/seed storage/lipid transfer protein (LTP) family protein (HF=1e+1)
Module size 6 genes
NF 0.23
%ile 18.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5065.70.99ZmAffx.1135.1.S1_atAW331161--1e+1At4g08670protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.4861.30.99Zm.12012.1.A1_atCA405115--2e+0At4g08530protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.2724.60.99Zm.5316.1.A1_atAY107908.1--2e-3At2g46225ABIL1 (Abi-1-like 1)O.I.H.G.S.X.
0.2521.30.99Zm.9157.1.A1_atCB351321molybdenum cofactor synthesis protein 2 large subunit-7e+0At1g50760unknown proteinO.I.H.G.S.X.
0.147.70.99Zm.8793.1.A1_atCD436545--3e+0At5g11770NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrialO.I.H.G.S.X.
0.125.90.99ZmAffx.1420.1.S1_at40794996-95--5e-2At2g07706unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.698.3GSM320459protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.398.2GSM320461protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.098.2GSM320462protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.998.2GSM320460protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.198.0GSM320464protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.098.0GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.098.0GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.897.9GSM320463protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.497.8GSM320458protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.897.2GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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