Co-expression analysis

Gene ID ZmAffx.1132.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At5g18040: unknown protein (HF=3e+0)
Module size 11 genes
NF 0.35
%ile 36.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8796.40.99ZmAffx.1132.1.A1_atAW330934--3e+0At5g18040unknown proteinO.I.H.G.S.X.
0.5571.60.99ZmAffx.776.1.S1_atAI746212--5e-2At5g46250RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.4455.70.99ZmAffx.201.1.S1_atAI670148--3e+0At2g27740unknown proteinO.I.H.G.S.X.
0.4455.70.99Zm.3169.5.S1_a_atAI739763hypothetical protein LOC100279753 /// minichromosome maintenance protein-1e-1At5g44635minichromosome maintenance family protein / MCM family proteinO.I.H.G.S.X.
0.3336.00.99ZmAffx.1046.1.A1_atAI881792--8e-1At1g79160unknown proteinO.I.H.G.S.X.
0.2928.10.99Zm.19.1.S1_atM57249.1phospholipid transfer protein homolog1-5e+0At4g32105galactosyltransferaseO.I.H.G.S.X.
0.2622.70.99Zm.2605.1.S1_atAY105350.1hypothetical protein LOC100192590-2e+0At5g416706-phosphogluconate dehydrogenase family proteinO.I.H.G.S.X.
0.2521.30.99ZmAffx.1040.1.A1_atAI881777--3e+0At1g49590formin-binding protein-relatedO.I.H.G.S.X.
0.2419.80.99ZmAffx.758.1.S1_atAI746000--3e-3At4g22260IM (IMMUTANS)O.I.H.G.S.X.
0.2115.50.99ZmAffx.719.1.A1_atAI739898--2e+0At3g55646unknown proteinO.I.H.G.S.X.
0.1710.60.99Zm.11475.1.A1_a_atBQ539206hypothetical protein LOC100273223-1e-3At2g45330emb1067 (embryo defective 1067)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.498.5GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.198.5GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.098.5GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.998.3GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.298.2GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.598.1GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.897.9GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.797.9GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.497.8GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.294.5GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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