Co-expression analysis

Gene ID ZmAffx.1113.1.A1_at
Gene name Hypothetical protein LOC100216906
Homology with ArabidopsisSimilar to At4g33550: lipid binding (HF=4e+0)
Module size 6 genes
NF 0.68
%ile 89.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.71ZmAffx.1113.1.A1_atAI600810Hypothetical protein LOC100216906-4e+0At4g33550lipid bindingO.I.H.G.S.X.
0.6785.80.71Zm.910.1.A1_atCK347167--7e-13At2g45640SAP18 (SIN3 ASSOCIATED POLYPEPTIDE P18)O.I.H.G.S.X.
0.6785.80.71Zm.7906.1.A1_atBM268263zinc finger homeodomain protein 1-6e-3At3g28917MIF2 (MINI ZINC FINGER 2)O.I.H.G.S.X.
0.6785.80.78Zm.17634.1.A1_atCK367914--9e-1At4g19270unknown proteinO.I.H.G.S.X.
0.5065.70.73Zm.818.2.A1_atCO531833Hypothetical protein LOC100216560-1e+1At5g67490unknown proteinO.I.H.G.S.X.
0.3641.30.76Zm.14283.1.A1_atCF63669860S ribosomal protein L19-1e-48At4g0223060S ribosomal protein L19 (RPL19C)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.598.1GSM320462protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.498.1GSM320459protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.298.0GSM320460protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.997.9GSM320463protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.897.9GSM320461protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.797.9GSM320464protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.597.8GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.197.7GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.797.6GSM320458protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.297.4GSM320472protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the barley gene, Contig21580_at, orthologous to the query gene, ZmAffx.1113.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9799.6Contig21580_atAt4g33550--4e+0At1g23740oxidoreductase, zinc-binding dehydrogenase family proteinO.I.H.G.S.X.
0.5066.9Contig12243_atAt4g33550--2e+0At4g02370unknown proteinO.I.H.G.S.X.
0.4153.9Contig8678_atAt4g33550--3e-17At1g31230AK-HSDH I (ASPARTATE KINASE-HOMOSERINE DEHYDROGENASE I)O.I.H.G.S.X.
0.4053.1Contig16905_atAt4g33550--1e-32At5g47520AtRABA5a (Arabidopsis Rab GTPase homolog A5a)O.I.H.G.S.X.
0.4053.1Contig154_atAt4g33550--4e-4At4g27230HTA2 (histone H2A)O.I.H.G.S.X.
0.3747.9Contig1628_atAt4g33550--4e-8At1g69180CRC (CRABS CLAW)O.I.H.G.S.X.
0.3747.9Contig333_3_x_atAt4g33550--O.I.H.G.S.X.
0.3747.9HV_CEb0003J15r2_atAt4g33550--3e+0At4g08878inorganic phosphate transporter, putativeO.I.H.G.S.X.
0.3647.1Contig344_atAt4g33550--5e-1At1g71520AP2 domain-containing transcription factor, putativeO.I.H.G.S.X.
0.3545.1Contig21181_atAt4g33550--2e-2At2g47350PAPA-1-like family protein / zinc finger (HIT type) family proteinO.I.H.G.S.X.
0.3443.6Contig2585_s_atAt4g33550--5e-3At5g13500unknown proteinO.I.H.G.S.X.
0.3443.6Contig17213_atAt4g33550--1e+0At2g44110MLO15 (MILDEW RESISTANCE LOCUS O 15)O.I.H.G.S.X.
0.3443.6HS05E04u_s_atAt4g33550--4e-3At5g35590PAA1 (PROTEASOME ALPHA SUBUNIT A 1)O.I.H.G.S.X.
0.3443.6rbaal18e24_s_atAt4g33550--9e+0At4g06536-O.I.H.G.S.X.
0.3342.6Contig9785_atAt4g33550--9e-4At4g25620hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.3342.6Contig4185_atAt4g33550--5e-2At2g39050hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.3342.6Contig9264_atAt4g33550--2e+0At2g04870unknown proteinO.I.H.G.S.X.
0.3342.6Contig6968_atAt4g33550--8e-19At3g22830AT-HSFA6BO.I.H.G.S.X.
0.3240.3Contig5040_atAt4g33550--6e-90At5g49460ACLB-2 (ATP CITRATE LYASE SUBUNIT B 2)O.I.H.G.S.X.
0.3240.3Contig3470_atAt4g33550--1e-11At2g37340RSZ33O.I.H.G.S.X.
0.3240.3Contig6376_atAt4g33550--1e-10At5g09900EMB2107 (EMBRYO DEFECTIVE 2107)O.I.H.G.S.X.
0.3240.3Contig15079_atAt4g33550--1e-2Atmg00210-O.I.H.G.S.X.
0.3240.3Contig4737_s_atAt4g33550--3e-29At2g35040AICARFT/IMPCHase bienzyme family proteinO.I.H.G.S.X.
0.3240.3Contig13002_atAt4g33550--2e-10At1g45150unknown proteinO.I.H.G.S.X.
0.3240.3Contig12252_atAt4g33550--6e-1At3g46770transcriptional factor B3 family proteinO.I.H.G.S.X.
0.3240.3Contig1502_s_atAt4g33550--9e-1At5g63230-O.I.H.G.S.X.
0.3138.6Contig576_s_atAt4g33550--2e-21At5g59690histone H4O.I.H.G.S.X.
0.3037.0Contig6385_atAt4g33550--1e+0At2g02870kelch repeat-containing F-box family proteinO.I.H.G.S.X.
0.2935.5Contig6465_atAt4g33550--2e-11At4g36960RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.2835.5Contig5234_atAt4g33550--5e-11At1g09140SF2/ASF-like splicing modulator (SRP30)O.I.H.G.S.X.
0.2835.5Contig609_atAt4g33550--7e+0At2g04420nucleic acid bindingO.I.H.G.S.X.
0.2835.5Contig459_s_atAt4g33550--0At1g07920elongation factor 1-alpha / EF-1-alphaO.I.H.G.S.X.
0.2630.4Contig3559_atAt4g33550--1e-86At1g24510T-complex protein 1 epsilon subunit, putative / TCP-1-epsilon, putative / chaperonin, putativeO.I.H.G.S.X.
0.2326.1Contig14242_atAt4g33550--1e+0At5g42800DFR (DIHYDROFLAVONOL 4-REDUCTASE)O.I.H.G.S.X.
0.2224.2Contig3967_atAt4g33550--6e-16At5g47040LON2 (LON PROTEASE 2)O.I.H.G.S.X.
0.1919.6Contig12407_atAt4g33550--7e-1At2g44130kelch repeat-containing F-box family proteinO.I.H.G.S.X.
0.1919.6Contig12335_atAt4g33550--5e-20At2g22120protein binding / zinc ion bindingO.I.H.G.S.X.
0.1514.1Contig14530_atAt4g33550--2e+0At1g10820unknown proteinO.I.H.G.S.X.
0.1311.6Contig5897_atAt4g33550--6e-1At5g27810sequence-specific DNA binding / transcription factorO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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