Co-expression analysis

Gene ID ZmAffx.1097.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g25770: unknown protein (HF=1e+1)
Module size 6 genes
NF 0.78
%ile 96.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.98ZmAffx.1097.1.S1_atAW120085--1e+1At5g25770unknown proteinO.I.H.G.S.X.
0.7792.10.98Zm.18590.1.A1_atAW562614exostosin-like-1e+0At5g22930unknown proteinO.I.H.G.S.X.
0.7389.90.98Zm.1546.3.A1_x_atCK369824--1e-6At1g15270-O.I.H.G.S.X.
0.7188.20.98Zm.18903.1.A1_atCO530915--7e-2At5g07400forkhead-associated domain-containing protein / FHA domain-containing proteinO.I.H.G.S.X.
0.6077.80.98Zm.6418.1.S1_atAY108322.1hypothetical protein LOC100216693-2e-1At3g44580unknown proteinO.I.H.G.S.X.
0.5571.60.98Zm.5441.1.S1_atCO528962hypothetical protein LOC100274317-3e+0At3g23130SUP (SUPERMAN)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.298.8GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.198.8GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.998.6GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.897.9GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.297.4GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.296.9GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.596.3GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.396.1GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.195.9GSM206332Lower pulvinus 15 min polysomal RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
3.194.3GSM320458protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the rice gene, Os07g0663900, orthologous to the query gene, ZmAffx.1097.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9599.6Os07g0663900At5g25770-Short-chain dehydrogenase/reductase SDR familyprotein2e+0At5g44450methyltransferaseO.I.H.G.S.X.
0.4458.1Os08g0407766At5g25770--8e-1At5g21280hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.4458.1Os01g0289800At5g25770--3e+0At5g04440unknown proteinO.I.H.G.S.X.
0.4458.1Os08g0126100At5g25770--5e+0At2g35090unknown proteinO.I.H.G.S.X.
0.4152.4Os10g0437850At5g25770--9e-2At5g63480unknown proteinO.I.H.G.S.X.
0.4152.4Os11g0285100At5g25770--8e+0At5g16140peptidyl-tRNA hydrolase family proteinO.I.H.G.S.X.
0.3948.3Os08g0387000At5g25770--3e+0At3g13240unknown proteinO.I.H.G.S.X.
0.3846.9Os04g0298700At5g25770-Conserved hypothetical protein2e+0At5g64400-O.I.H.G.S.X.
0.3846.9Os06g0640800At5g25770-Cytochrome P450 family protein3e+0At5g4770060S acidic ribosomal protein P1 (RPP1C)O.I.H.G.S.X.
0.3846.9Os03g0600101At5g25770--6e+0At2g33380RD20 (RESPONSIVE TO DESSICATION 20)O.I.H.G.S.X.
0.3644.0Os09g0301000At5g25770--1e+0At2g26975copper transporter, putativeO.I.H.G.S.X.
0.3541.7Os10g0177800At5g25770--2e+0At1g04270RPS15 (CYTOSOLIC RIBOSOMAL PROTEIN S15)O.I.H.G.S.X.
0.3338.8Os11g0489800At5g25770--1e-2At5g54540-O.I.H.G.S.X.
0.3032.7Os04g0359700At5g25770-Zinc-containing alcohol dehydrogenase superfamilyprotein5e-2At4g13010oxidoreductase, zinc-binding dehydrogenase family proteinO.I.H.G.S.X.
0.2931.1Os12g0606000At5g25770-Protein of unknown function DUF26 domaincontaining protein4e-4At5g06740lectin protein kinase family proteinO.I.H.G.S.X.
0.2931.1Os12g0258300At5g25770--7e+0At4g29240leucine-rich repeat family protein / extensin family proteinO.I.H.G.S.X.
0.2931.1Os03g0234500At5g25770-Haem peroxidase, plant/fungal/bacterial familyprotein3e-5At5g67400peroxidase 73 (PER73) (P73) (PRXR11)O.I.H.G.S.X.
0.2625.6Os12g0624400At5g25770--6e-1At5g27690heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.2625.6Os01g0754300At5g25770-Hypothetical protein3e+0At4g36500unknown proteinO.I.H.G.S.X.
0.2422.4Os08g0275200At5g25770-Protein kinase domain containing protein1e-2At4g29240leucine-rich repeat family protein / extensin family proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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