Co-expression analysis

Gene ID ZmAffx.1083.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At1g59830: PP2A-1 (HF=1e+0)
Module size 9 genes
NF 0.39
%ile 43.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5775.10.99ZmAffx.1083.1.A1_atAI974922--1e+0At1g59830PP2A-1O.I.H.G.S.X.
0.5065.70.99ZmAffx.228.1.A1_atAI670240--5e-2At5g59000zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.4455.70.99ZmAffx.600.1.S1_atAI715028--3e+0At5g16390CAC1 (CHLOROPLASTIC ACETYLCOENZYME A CARBOXYLASE 1)O.I.H.G.S.X.
0.4455.70.99ZmAffx.765.1.A1_atAI746076hypothetical protein LOC100279036-4e+0At5g11660unknown proteinO.I.H.G.S.X.
0.4048.50.99Zm.4299.1.S1_atCF046651hypothetical protein LOC100279924-5e-14At3g21630CERK1 (CHITIN ELICITOR RECEPTOR KINASE 1)O.I.H.G.S.X.
0.3945.60.99Zm.12679.1.S1_atBU571579hypothetical protein LOC100217156-7e-1At5g42510disease resistance-responsive family proteinO.I.H.G.S.X.
0.3538.90.99Zm.6559.1.A1_atCF051688--3e-14At5g26830threonyl-tRNA synthetase / threonine--tRNA ligase (THRRS)O.I.H.G.S.X.
0.2928.10.99Zm.11779.1.A1_atCO527258hypothetical protein LOC100217298-3e+0At3g47800aldose 1-epimerase family proteinO.I.H.G.S.X.
0.2318.60.99Zm.6376.1.A1_atAY106982.1--2e-1At1g68560XYL1 (ALPHA-XYLOSIDASE 1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.898.6GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.698.6GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.298.5GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.998.3GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.698.3GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.598.1GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.597.8GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.497.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.897.6GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
1.788.2GSM206329Right pulvinus control polysomal RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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