Co-expression analysis

Gene ID ZmAffx.1082.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At1g60983: SCRL8 (SCR-Like 8) (HF=3e+0)
Module size 31 genes
NF 0.30
%ile 28.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8595.90.97ZmAffx.1082.1.A1_atAI973391--3e+0At1g60983SCRL8 (SCR-Like 8)O.I.H.G.S.X.
0.4556.40.97Zm.9900.1.A1_atBM351046--2e-2At5g28610-O.I.H.G.S.X.
0.4556.40.97Zm.17785.1.A1_atCK369198--4e+0At5g20100unknown proteinO.I.H.G.S.X.
0.4251.30.98Zm.17784.1.S1_atCK370703--3e-2At1g53030cytochrome c oxidase copper chaperone family proteinO.I.H.G.S.X.
0.3945.60.97Zm.206.3.S1_a_atY09636.140S ribosomal subunit protein S21-5e-12At3g5389040S ribosomal protein S21 (RPS21B)O.I.H.G.S.X.
0.3945.60.97Zm.5321.1.A1_atBG841445hypothetical protein LOC100191836-5e+0At2g45250unknown proteinO.I.H.G.S.X.
0.3742.30.97ZmAffx.97.1.S1_atAI665446--1e-2At1g17790DNA-binding bromodomain-containing proteinO.I.H.G.S.X.
0.3641.30.98Zm.11328.1.A1_atCA401316hypothetical protein LOC100274553-6e+0At2g30130ASL5O.I.H.G.S.X.
0.3538.90.98Zm.1134.1.A1_atAY112160.1hypothetical protein LOC100193278-3e+0At2g26940zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.3336.00.98Zm.547.1.A1_atCK827104glutathione transferase17-1e-1At1g02405proline-rich family proteinO.I.H.G.S.X.
0.3336.00.98Zm.9285.1.A1_atBM339972disease resistance response protein 206-6e+0At5g46874-O.I.H.G.S.X.
0.3336.00.97ZmAffx.893.1.S1_atAI770864--8e-1At1g19850MP (MONOPTEROS)O.I.H.G.S.X.
0.3233.40.98Zm.8612.1.A1_atBM074907hypothetical protein LOC100278970-6e+0At3g27380SDH2-1O.I.H.G.S.X.
0.3233.40.98Zm.17521.1.S1_atCK370540complex 1 protein containing protein-2e+0At4g39340unknown proteinO.I.H.G.S.X.
0.3233.40.97Zm.14120.1.S1_atAY105834.1--7e-30At1g71220EBS1 (EMS-mutagenized bri1 suppressor 1)O.I.H.G.S.X.
0.3131.60.97Zm.7750.4.S1_atAW499152--3e-28At1g75780TUB1O.I.H.G.S.X.
0.3029.80.97Zm.13679.1.A1_atAW424469chemocyanin-9e-5At1g72230plastocyanin-like domain-containing proteinO.I.H.G.S.X.
0.2928.10.98Zm.11840.1.A1_atCO524568metallopeptidase-4e-9At4g20070ATAAH (Arabidopsis thaliana Allantoate Amidohydrolase)O.I.H.G.S.X.
0.2622.70.98Zm.14898.1.A1_x_atBM351319--4e+0At3g43800ATGSTU27 (GLUTATHIONE S-TRANSFERASE TAU 27)O.I.H.G.S.X.
0.2622.70.98ZmAffx.936.1.S1_atAI677620--3e+0At3g10490anac052 (Arabidopsis NAC domain containing protein 52)O.I.H.G.S.X.
0.2419.80.99Zm.7309.1.S1_atAF384036.1nucleosome/chromatin assembly factor A-2e-3At1g18800NRP2 (NAP1-RELATED PROTEIN 2)O.I.H.G.S.X.
0.2419.80.97Zm.3930.1.S1_atBQ538158AMP-binding protein-8e-37At3g05970LACS6 (long-chain acyl-CoA synthetase 6)O.I.H.G.S.X.
0.2318.60.98ZmAffx.1103.1.S1_atAW191100--1e+1At5g43700ATAUX2-11 (AUXIN INDUCIBLE 2-11)O.I.H.G.S.X.
0.2318.60.98Zm.18109.1.S1_atAI881274--3e+0At4g23340oxidoreductase, 2OG-Fe(II) oxygenase family proteinO.I.H.G.S.X.
0.2318.60.97Zm.10112.1.A1_atBM268000--1e+0At5g23810AAP7O.I.H.G.S.X.
0.2216.90.98Zm.18084.1.A1_atCD997940--8e-7At1g16870mitochondrial 28S ribosomal protein S29-relatedO.I.H.G.S.X.
0.2014.20.98Zm.5230.1.A1_atCA404914acyl-desaturase-2e-17At2g43710SSI2O.I.H.G.S.X.
0.1912.80.98Zm.6555.2.S1_atCD446565hypothetical protein LOC100273907-1e-31At3g11710ATKRS-1 (ARABIDOPSIS THALIANA LYSYL-TRNA SYNTHETASE 1)O.I.H.G.S.X.
0.1710.60.98Zm.8600.1.S1_atAY107085.1--6e-2At5g52200unknown proteinO.I.H.G.S.X.
0.1710.60.98Zm.18135.1.A1_atCN845300--4e+0Atmg01410-O.I.H.G.S.X.
0.125.90.98Zm.8752.1.A1_atAY107176.1hypothetical protein LOC100278587-4e-2At2g32260cholinephosphate cytidylyltransferase, putative / phosphorylcholine transferase, putative / CTP:phosphocholine cytidylyltransferase, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
16.499.0GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.898.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.798.8GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.798.6GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.098.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.098.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.898.3GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.298.0GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.198.0GSM375788Deep-sowing 10d treatment Control, biological rep1GSE15048Gibberellin-induced gene expression in maize mesocotyl under deep-sowing conditionLink to GEO
6.197.4GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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