Co-expression analysis

Gene ID ZmAffx.108.1.S1_at
Gene name Hypothetical protein LOC100191707
Homology with ArabidopsisSimilar to At5g39640: unknown protein (HF=8e-1)
Module size 19 genes
NF 0.46
%ile 55.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9097.00.99ZmAffx.108.1.S1_atAI665554Hypothetical protein LOC100191707-8e-1At5g39640unknown proteinO.I.H.G.S.X.
0.6785.80.99ZmAffx.1103.1.A1_atAW191100--1e+1At5g43700ATAUX2-11 (AUXIN INDUCIBLE 2-11)O.I.H.G.S.X.
0.5875.11.00Zm.3169.5.S1_x_atAI739763minichromosome maintenance protein-1e-1At5g44635minichromosome maintenance family protein / MCM family proteinO.I.H.G.S.X.
0.5674.40.99Zm.5177.1.A1_atAY105486.1--2e+0At5g03710unknown proteinO.I.H.G.S.X.
0.5571.60.99Zm.12184.1.A1_atBM380021--6e-10At4g11960PGRL1B (PGR5-Like B)O.I.H.G.S.X.
0.5166.41.00ZmAffx.1183.1.A1_atAW927833--1e+0At1g19920APS2O.I.H.G.S.X.
0.4961.90.99Zm.12300.1.A1_atCF626520ruBisCO large subunit-binding protein subunit alpha-1e-37At2g28000CPN60A (CHAPERONIN-60ALPHA)O.I.H.G.S.X.
0.4861.31.00Zm.1368.1.A1_atCA399867calcineurin B-like protein 3-3e-40At5g55990CBL2 (CALCINEURIN B-LIKE 2)O.I.H.G.S.X.
0.4759.90.99Zm.4390.1.A1_atAI714448hypothetical protein LOC100191618-1e-8At3g06190BPM2 (BTB-POZ AND MATH DOMAIN 2)O.I.H.G.S.X.
0.4352.80.99Zm.17928.1.A1_atBQ538697hypothetical protein LOC100217238-4e+0At5g09660PMDH2 (peroxisomal NAD-malate dehydrogenase 2)O.I.H.G.S.X.
0.4149.70.99ZmAffx.406.1.A1_atAI670258--4e-1At2g01505CLE16 (CLAVATA3/ESR-RELATED 16)O.I.H.G.S.X.
0.3945.60.99ZmAffx.89.1.A1_atAI665353hypothetical protein LOC100277768-1e+1At5g20560beta-1,3-glucanase, putativeO.I.H.G.S.X.
0.3844.20.99Zm.10501.1.S1_atBQ485592hypothetical protein LOC100194407-7e+0At5g66005Expressed proteinO.I.H.G.S.X.
0.3844.20.99ZmAffx.543.1.S1_atAI712085--3e+0At4g03510RMA1O.I.H.G.S.X.
0.3742.31.00Zm.14841.1.A1_atAI491693hypothetical protein LOC100191514-2e+0At2g07681cytochrome c biogenesis protein, putativeO.I.H.G.S.X.
0.3538.91.00Zm.2354.1.A1_atCK371344hypothetical protein LOC100276103 /// hypothetical protein LOC100276361-3e-2At5g28610-O.I.H.G.S.X.
0.3233.41.00ZmAffx.1092.1.S1_s_atAW066155--1e-107Atcg00490-O.I.H.G.S.X.
0.3131.60.99Zm.127.3.A1_a_atAI677333octopine synthase binding factor1-6e+0At5g04080unknown proteinO.I.H.G.S.X.
0.2828.11.00ZmAffx.900.1.A1_atAI770893--1e+1At5g19480unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
24.199.6GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
22.499.5GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
20.999.4GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.098.2GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.698.1GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.797.6GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.996.7GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.796.5GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.394.7GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.793.2GSM320464protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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