Co-expression analysis

Gene ID ZmAffx.1079.1.A1_at
Gene name hypothetical protein LOC100273248
Homology with ArabidopsisSimilar to At3g01020: ISU2 (ISCU-LIKE 2) (HF=7e-1)
Module size 6 genes
NF 0.15
%ile 9.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.92ZmAffx.1079.1.A1_atAI948298hypothetical protein LOC100273248-7e-1At3g01020ISU2 (ISCU-LIKE 2)O.I.H.G.S.X.
0.4048.50.97Zm.18389.1.S1_atCF625987--8e-34At1g02410cytochrome c oxidase assembly protein CtaG / Cox11 familyO.I.H.G.S.X.
0.4048.50.97Zm.12794.1.A1_atAY109927.1protein kinase domain containing protein-8e-3At5g53450ORG1 (OBP3-responsive gene 1)O.I.H.G.S.X.
0.2014.20.97Zm.12716.2.A1_atAI833884--3e+0At1g12630DNA binding / transcription activator/ transcription factorO.I.H.G.S.X.
0.104.60.97Zm.5959.1.A1_atAI665952--1e-6At4g30720electron carrier/ oxidoreductaseO.I.H.G.S.X.
0.041.50.97Zm.618.1.S1_atAF326506.1tonoplast membrane integral protein ZmTIP4-2-1e-2At2g25810TIP4O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.597.1GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.396.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.296.9GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.796.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.596.3GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.496.2GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.695.2GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.695.2GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.294.5GSM206317Right pulvinus control total RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
3.094.0GSM206329Right pulvinus control polysomal RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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