Co-expression analysis

Gene ID	ZmAffx.1073.1.A1_at
Gene name	glyoxylate reductase
Homology with Arabidopsis	Similar to At5g60964: - (HF=3e+0)
Module size	14 genes
NF	0.29
%ile	25.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.84	95.8	0.94	ZmAffx.1073.1.A1_at	AI947671	glyoxylate reductase	-	3e+0	At5g60964	-	O.I.	H.G.	S.X.	Please select
0.41	49.7	0.96	Zm.12794.1.A1_at	AY109927.1	protein kinase domain containing protein	-	8e-3	At5g53450	ORG1 (OBP3-responsive gene 1)	O.I.	H.G.	S.X.	Please select
0.41	49.7	0.97	Zm.17271.8.A1_at	BM340602	40S ribosomal protein S10	-	3e-11	At5g52650	40S ribosomal protein S10 (RPS10C)	O.I.	H.G.	S.X.	Please select
0.40	48.5	0.95	Zm.5948.2.A1_at	BE643594	-	-	1e+1	At5g08190	NF-YB12 (NUCLEAR FACTOR Y, SUBUNIT B12)	O.I.	H.G.	S.X.	Please select
0.31	31.6	0.96	Zm.19070.1.A1_at	CD444468	glycylpeptide N-tetradecanoyltransferase 1	-	3e-2	At5g57020	NMT1 (MYRISTOYL-COA:PROTEIN N-MYRISTOYLTRANSFERASE)	O.I.	H.G.	S.X.	Please select
0.30	29.8	0.96	Zm.12934.1.A1_a_at	AY106367.1	-	-	2e+0	At1g80200	unknown protein	O.I.	H.G.	S.X.	Please select
0.29	28.1	0.96	Zm.13321.1.A1_at	BQ294179	hypothetical protein LOC100277614	-	2e-1	At1g09630	ATRAB11C (ARABIDOPSIS RAB GTPASE 11C)	O.I.	H.G.	S.X.	Please select
0.29	28.1	0.97	Zm.18389.1.S1_at	CF625987	-	-	8e-34	At1g02410	cytochrome c oxidase assembly protein CtaG / Cox11 family	O.I.	H.G.	S.X.	Please select
0.28	28.1	0.97	Zm.5372.1.S1_at	AW000380	secondary cell wall-related glycosyltransferase family 8	-	5e-15	At3g18660	PGSIP1 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.23	18.6	0.96	Zm.10187.1.S1_at	CF634502	hypothetical protein LOC100216724	-	9e-4	At5g51460	ATTPPA	O.I.	H.G.	S.X.	Please select
0.20	14.2	0.95	Zm.18302.1.A1_at	CO520491	hypothetical protein LOC100276531	-	1e-3	At2g22250	aminotransferase class I and II family protein	O.I.	H.G.	S.X.	Please select
0.17	10.6	0.96	Zm.4689.1.S1_at	AI738229	hypothetical protein LOC100276687	-	2e+0	At1g68500	unknown protein	O.I.	H.G.	S.X.	Please select
0.12	5.9	0.96	Zm.6655.1.A1_at	CF624351	hypothetical protein LOC100193491	-	4e-21	At5g09660	PMDH2 (peroxisomal NAD-malate dehydrogenase 2)	O.I.	H.G.	S.X.	Please select
0.10	4.6	0.97	Zm.8890.1.S1_a_at	BM379881	hypothetical protein LOC100191584	-	1e-8	At4g25820	XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
27.0	99.7	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
24.6	99.6	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
23.6	99.5	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.9	99.0	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.4	98.9	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.0	98.8	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.9	98.8	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.1	98.6	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.0	98.6	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.6	95.2	GSM320460	protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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