| Gene ID | ZmAffx.1053.1.A1_at |
| Gene name | |
| Homology with Arabidopsis | Similar to At1g16240: SYP51 (SYNTAXIN OF PLANTS 51) (HF=3e+0) |
| Module size | 6 genes |
| NF | 0.26 |
| %ile | 21.3 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.55 | 71.6 | 0.95 | ZmAffx.1053.1.A1_at | AI881846 | - | - | 3e+0 | At1g16240 | SYP51 (SYNTAXIN OF PLANTS 51) | O.I. | H.G. | S.X. | |
| 0.59 | 76.1 | 0.95 | Zm.5132.1.A1_at | AY105555.1 | calcium lipid binding protein-like | - | 7e-1 | At1g15320 | unknown protein | O.I. | H.G. | S.X. | |
| 0.50 | 65.7 | 0.94 | Zm.4359.2.A1_at | AI795776 | EMB2756 | - | 2e+0 | At5g52160 | protease inhibitor/seed storage/lipid transfer protein (LTP) family protein | O.I. | H.G. | S.X. | |
| 0.44 | 55.7 | 0.96 | Zm.144.2.A1_at | BE123186 | Metallothionein2 | - | 1e+1 | At3g58370 | K-Cl Co-transporter type 1 protein-related / KCC1 protein-related | O.I. | H.G. | S.X. | |
| 0.31 | 31.6 | 0.95 | Zm.19103.1.S1_at | CF625279 | hypothetical protein LOC100193224 | - | 3e+0 | At4g09490 | RNase H domain-containing protein | O.I. | H.G. | S.X. | |
| 0.09 | 4.0 | 0.94 | Zm.16394.1.S1_at | CF272871 | - | - | 1e-1 | At2g03470 | myb family transcription factor / ELM2 domain-containing protein | O.I. | H.G. | S.X. |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB | 0.71 | 88.2 | 0.94 | Zm.13528.1.A1_at | CO529656 | hypothetical protein LOC100216925 | - | 4e-1 | At2g18860 | syntaxin family protein | O.I. | H.G. | S.X. | 0.50 | 65.7 | 0.94 | Zm.6023.1.S1_at | AY059648.1 | alternative oxidase AOX3 precursor | - | 1e-5 | At1g32350 | AOX1D (alternative oxidase 1D) | O.I. | H.G. | S.X. | 0.48 | 61.3 | 0.91 | Zm.8468.1.A1_at | BM074266 | gibberellin receptor GID1L2 | - | 6e+0 | At3g45480 | zinc ion binding | O.I. | H.G. | S.X. | 0.40 | 48.5 | 0.94 | Zm.11291.2.S1_x_at | CA401976 | - | - | 9e-3 | At1g48130 | ATPER1 | O.I. | H.G. | S.X. | 0.39 | 45.6 | 0.92 | Zm.8142.1.A1_at | BM080424 | hypothetical protein LOC100275043 | - | 4e-4 | At1g05420 | OFP12 (OVATE FAMILY PROTEIN 12) | O.I. | H.G. | S.X. | 0.33 | 36.0 | 0.93 | Zm.8233.2.S1_a_at | BM381462 | splicing factor, arginine/serine-rich 7 | - | 2e-3 | At4g31580 | SRZ-22 | O.I. | H.G. | S.X. | 0.31 | 31.6 | 0.95 | Zm.1546.1.A1_at | BM348327 | hypothetical protein LOC100273379 | - | 6e-22 | At3g20390 | endoribonuclease L-PSP family protein | O.I. | H.G. | S.X. | 0.30 | 29.8 | 0.90 | Zm.11756.1.A1_x_at | BM380495 | Alpha expansin2 | - | 3e+0 | At1g35537 | - | O.I. | H.G. | S.X. | 0.30 | 29.8 | 0.91 | Zm.10200.1.A1_at | BM379455 | hypothetical protein LOC100274487 | - | 4e-6 | At4g30020 | subtilase family protein | O.I. | H.G. | S.X. | 0.28 | 28.1 | 0.94 | Zm.19054.1.A1_at | CO534445 | bile acid sodium symporter/ transporter | - | 3e+0 | At5g03660 | unknown protein | O.I. | H.G. | S.X. | 0.25 | 21.3 | 0.93 | Zm.8677.1.A1_at | CO531412 | structural constituent of ribosome | - | 2e-1 | At3g26147 | unknown protein | O.I. | H.G. | S.X. | 0.25 | 21.3 | 0.94 | Zm.3454.1.S1_at | AW282335 | sex determination protein tasselseed-2 | - | 3e+0 | At2g27130 | protease inhibitor/seed storage/lipid transfer protein (LTP) family protein | O.I. | H.G. | S.X. | 0.25 | 21.3 | 0.94 | Zm.6159.2.A1_x_at | BE510560 | - | - | 1e-20 | At2g34160 | nucleic acid binding | O.I. | H.G. | S.X. |
|---|
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 14.6 | 98.9 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 13.3 | 98.8 | GSM320451 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 11.9 | 98.6 | GSM320447 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 11.6 | 98.6 | GSM320450 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 11.0 | 98.5 | GSM320452 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 10.2 | 98.4 | GSM320448 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 8.9 | 98.2 | GSM320449 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 8.6 | 98.1 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 8.3 | 98.0 | GSM320454 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 3.0 | 94.0 | GSM320457 | protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Oryza_sativa |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
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