Co-expression analysis

Gene ID ZmAffx.1053.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At1g16240: SYP51 (SYNTAXIN OF PLANTS 51) (HF=3e+0)
Module size 6 genes
NF 0.26
%ile 21.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5571.60.95ZmAffx.1053.1.A1_atAI881846--3e+0At1g16240SYP51 (SYNTAXIN OF PLANTS 51)O.I.H.G.S.X.
0.5976.10.95Zm.5132.1.A1_atAY105555.1calcium lipid binding protein-like-7e-1At1g15320unknown proteinO.I.H.G.S.X.
0.5065.70.94Zm.4359.2.A1_atAI795776EMB2756-2e+0At5g52160protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.4455.70.96Zm.144.2.A1_atBE123186Metallothionein2-1e+1At3g58370K-Cl Co-transporter type 1 protein-related / KCC1 protein-relatedO.I.H.G.S.X.
0.3131.60.95Zm.19103.1.S1_atCF625279hypothetical protein LOC100193224-3e+0At4g09490RNase H domain-containing proteinO.I.H.G.S.X.
0.094.00.94Zm.16394.1.S1_atCF272871--1e-1At2g03470myb family transcription factor / ELM2 domain-containing proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.698.9GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.398.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.998.6GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.698.6GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.098.5GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.298.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.998.2GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.698.1GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.398.0GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.094.0GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.220676.1.S1_at, orthologous to the query gene, ZmAffx.1053.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.3052.0PtpAffx.220676.1.S1_atAt1g16240hypothetical protein-2e+1At4g33100-O.I.H.G.S.X.
0.4369.7Ptp.7288.1.S1_atAt1g16240hypothetical protein-2e-1At5g62550unknown proteinO.I.H.G.S.X.
0.3661.6PtpAffx.215974.1.S1_atAt1g16240--4e+0At1g21140nodulin, putativeO.I.H.G.S.X.
0.0914.6PtpAffx.5531.1.A1_atAt1g16240--1e+0At2g01400unknown proteinO.I.H.G.S.X.
0.035.2PtpAffx.3332.1.S1_atAt1g16240--2e-1At1g65190protein kinase family proteinO.I.H.G.S.X.
0.012.2PtpAffx.3392.1.S1_atAt1g16240hypothetical protein-8e-1At3g57910D111/G-patch domain-containing proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera



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