Co-expression analysis

Gene ID	ZmAffx.1050.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At4g35025: unknown protein (HF=3e+0)
Module size	10 genes
NF	0.46
%ile	55.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	85.8	0.95	ZmAffx.1050.1.A1_at	AI881808	-	-	3e+0	At4g35025	unknown protein	O.I.	H.G.	S.X.	Please select
0.55	71.6	0.97	Zm.14718.1.S1_at	CF009620	-	-	3e-21	At4g39800	MIPS1 (MYO-INOSITOL-1-PHOSTPATE SYNTHASE 1)	O.I.	H.G.	S.X.	Please select
0.46	58.4	0.97	Zm.4647.1.A1_at	CO523612	-	-	6e-3	At2g31370	bZIP transcription factor (POSF21)	O.I.	H.G.	S.X.	Please select
0.44	55.7	0.96	Zm.5388.1.S1_at	AW453245	hypothetical protein LOC100193632	-	6e-23	At3g09180	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	55.7	0.97	Zm.19053.1.S1_at	CO523639	hypothetical protein LOC100193386	-	2e+0	Atmg01020	-	O.I.	H.G.	S.X.	Please select
0.43	52.8	0.97	Zm.19271.1.A1_at	CO522612	hypothetical protein LOC100274689	-	3e-4	At1g17980	nucleotidyltransferase family protein	O.I.	H.G.	S.X.	Please select
0.37	42.3	0.97	Zm.19091.1.S1_at	CO526991	fiber protein Fb2	-	2e+0	At3g06820	mov34 family protein	O.I.	H.G.	S.X.	Please select
0.36	41.3	0.98	Zm.6418.1.S1_at	AY108322.1	hypothetical protein LOC100216693	-	2e-1	At3g44580	unknown protein	O.I.	H.G.	S.X.	Please select
0.34	37.2	0.97	Zm.4006.1.A1_at	BQ539204	hypothetical protein LOC100216950	-	2e+0	At4g22530	embryo-abundant protein-related	O.I.	H.G.	S.X.	Please select
0.31	31.6	0.98	Zm.18478.1.S1_at	CO521952	-	-	1e+1	At4g16400	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
22.0	99.4	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
18.1	99.2	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.7	99.1	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.2	99.1	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.0	98.9	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.0	98.8	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.3	98.8	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.1	98.6	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.1	98.5	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.4	96.2	GSM320464	protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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