Co-expression analysis

Gene ID	ZmAffx.1022.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g46800: BOU (A BOUT DE SOUFFLE) (HF=3e+0)
Module size	6 genes
NF	0.62
%ile	83.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.0	0.92	ZmAffx.1022.1.S1_at	AI881590	-	-	3e+0	At5g46800	BOU (A BOUT DE SOUFFLE)	O.I.	H.G.	S.X.	Please select
0.71	88.2	0.90	Zm.9355.1.A1_at	BM268784	-	-	1e+1	At5g19729	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.93	Zm.15613.1.A1_at	CD436975	hypothetical protein LOC100276373	-	6e-1	At5g45870	Bet v I allergen family protein	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.93	Zm.12987.1.S1_at	CA402309	-	-	3e+0	At2g46410	CPC (CAPRICE)	O.I.	H.G.	S.X.	Please select
0.57	75.1	0.91	Zm.12169.1.S1_at	CK370768	-	-	1e+0	At4g35300	TMT2 (TONOPLAST MONOSACCHARIDE TRANSPORTER2)	O.I.	H.G.	S.X.	Please select
0.26	22.7	0.93	Zm.4466.1.S1_at	AF461815.1	single myb histone4	-	1e-5	At1g17520	DNA-binding protein, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
13.1	98.7	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.0	98.7	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.0	98.7	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.2	98.6	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.9	98.5	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.8	98.5	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.5	98.4	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.3	98.4	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.2	98.2	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.5	95.1	GSM320467	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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