Co-expression analysis

Gene ID Zm.9996.1.A1_at
Gene name hypothetical protein LOC100273898
Homology with ArabidopsisSimilar to At4g02910: unknown protein (HF=3e-1)
Module size 7 genes
NF 0.19
%ile 13.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8696.30.85Zm.9996.1.A1_atBM350937hypothetical protein LOC100273898-3e-1At4g02910unknown proteinO.I.H.G.S.X.
0.4455.70.90Zm.15667.1.A1_atCD437700--1e+0At5g43280ATDCI1 (DELTA(3,5),DELTA(2,4)-DIENOYL-COA ISOMERASE 1)O.I.H.G.S.X.
0.3336.00.94Zm.13627.1.S1_atAY107420.1--3e-1At2g22200AP2 domain-containing transcription factorO.I.H.G.S.X.
0.2115.50.90Zm.5711.1.S1_atBM378175--7e+0At4g19400actin bindingO.I.H.G.S.X.
0.1811.60.89Zm.11972.1.A1_atBM382270--6e-2At3g29690transferase-relatedO.I.H.G.S.X.
0.104.60.88Zm.6734.1.S1_a_atBI430962--2e+0At1g24625ZFP7 (ZINC FINGER PROTEIN 7)O.I.H.G.S.X.
0.083.40.88Zm.889.3.S1_atAI834601--3e-4At4g38740ROC1 (ROTAMASE CYP 1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.898.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.798.7GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.298.6GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.998.6GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.898.6GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.198.5GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.998.5GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.998.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.298.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.194.3GSM206297Lower pulvinus 30 min total RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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