Co-expression analysis

Gene ID Zm.9984.1.A1_at
Gene name Hypothetical protein LOC100217031
Homology with ArabidopsisSimilar to At1g65000: unknown protein (HF=4e-4)
Module size 6 genes
NF 0.70
%ile 91.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5775.10.98Zm.9984.1.A1_atCO529085Hypothetical protein LOC100217031-4e-4At1g65000unknown proteinO.I.H.G.S.X.
0.8395.60.98Zm.4385.1.S1_atBQ487047small nuclear ribonucleoprotein-associated protein B-3e-15At5g44500small nuclear ribonucleoprotein associated protein B, putative / snRNP-B, putative / Sm protein B, putativeO.I.H.G.S.X.
0.7389.90.98Zm.4132.1.A1_atCO529833hypothetical protein LOC100276765-4e-14At1g16520unknown proteinO.I.H.G.S.X.
0.7389.90.98Zm.11605.1.A1_atBM379262--4e+0At4g11930unknown proteinO.I.H.G.S.X.
0.5065.70.98Zm.8233.1.A1_atAI947630--1e-2At4g31580SRZ-22O.I.H.G.S.X.
0.5065.70.99Zm.3633.2.S1_x_atCF634876APx1 - Cytosolic Ascorbate Peroxidase-3e-28At1g07890APX1 (ascorbate peroxidase 1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.598.7GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.598.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.498.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.198.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.898.3GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.098.2GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.898.1GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.898.1GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.498.1GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.391.7GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the rice gene, OsAffx.25815.1.S1_s_at, orthologous to the query gene, Zm.9984.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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