Co-expression analysis

Gene ID Zm.9984.1.A1_at
Gene name Hypothetical protein LOC100217031
Homology with ArabidopsisSimilar to At1g65000: unknown protein (HF=4e-4)
Module size 6 genes
NF 0.70
%ile 91.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5775.10.98Zm.9984.1.A1_atCO529085Hypothetical protein LOC100217031-4e-4At1g65000unknown proteinO.I.H.G.S.X.
0.8395.60.98Zm.4385.1.S1_atBQ487047small nuclear ribonucleoprotein-associated protein B-3e-15At5g44500small nuclear ribonucleoprotein associated protein B, putative / snRNP-B, putative / Sm protein B, putativeO.I.H.G.S.X.
0.7389.90.98Zm.4132.1.A1_atCO529833hypothetical protein LOC100276765-4e-14At1g16520unknown proteinO.I.H.G.S.X.
0.7389.90.98Zm.11605.1.A1_atBM379262--4e+0At4g11930unknown proteinO.I.H.G.S.X.
0.5065.70.98Zm.8233.1.A1_atAI947630--1e-2At4g31580SRZ-22O.I.H.G.S.X.
0.5065.70.99Zm.3633.2.S1_x_atCF634876APx1 - Cytosolic Ascorbate Peroxidase-3e-28At1g07890APX1 (ascorbate peroxidase 1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.598.7GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.598.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.498.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.198.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.898.3GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.098.2GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.898.1GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.898.1GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.498.1GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.391.7GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the barley gene, Contig17069_at, orthologous to the query gene, Zm.9984.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9198.1Contig17069_atAt1g65000--1e-2At1g65000unknown proteinO.I.H.G.S.X.
0.4053.1Contig6490_atAt1g65000--2e-35At5g56630PFK7 (PHOSPHOFRUCTOKINASE 7)O.I.H.G.S.X.
0.3950.5Contig26165_atAt1g65000--2e+1Atmg01060-O.I.H.G.S.X.
0.3443.6Contig15557_atAt1g65000--3e+0At4g10230unknown proteinO.I.H.G.S.X.
0.3240.3Contig11116_atAt1g65000--9e-1At3g12150unknown proteinO.I.H.G.S.X.
0.2935.5HU13K14u_atAt1g65000--4e-2At2g30530unknown proteinO.I.H.G.S.X.
0.2935.5Contig20533_atAt1g65000--6e+0At5g59950RNA and export factor-binding protein, putativeO.I.H.G.S.X.
0.2630.4HB12N12r_s_atAt1g65000--3e+0At4g19100unknown proteinO.I.H.G.S.X.
0.2326.1Contig16886_atAt1g65000--5e+0At5g60460sec61beta family proteinO.I.H.G.S.X.
0.2224.2Contig7352_atAt1g65000--2e+0At5g04440unknown proteinO.I.H.G.S.X.
0.2122.6Contig14264_atAt1g65000--2e+0At1g48780unknown proteinO.I.H.G.S.X.
0.2122.6Contig24339_atAt1g65000--4e+0At2g03710SEP4 (SEPALLATA 4)O.I.H.G.S.X.
0.2122.6Contig10646_atAt1g65000--1e-14At2g29990NDA2 (ALTERNATIVE NAD(P)H DEHYDROGENASE 2)O.I.H.G.S.X.
0.2122.6Contig16455_atAt1g65000--1e-1At3g46880unknown proteinO.I.H.G.S.X.
0.2021.1Contig8409_atAt1g65000--3e-1At5g09220AAP2 (AMINO ACID PERMEASE 2)O.I.H.G.S.X.
0.1818.2Contig14695_atAt1g65000--2e-4At5g46780VQ motif-containing proteinO.I.H.G.S.X.
0.1716.9HVSMEg0010P18r2_s_atAt1g65000--4e+0At5g62880ARAC10O.I.H.G.S.X.
0.1615.3Contig23564_atAt1g65000--1e+0At1g09932phosphoglycerate/bisphosphoglycerate mutase-relatedO.I.H.G.S.X.
0.1615.3Contig7277_atAt1g65000--3e-8At5g11110ATSPS2F (SUCROSE PHOSPHATE SYNTHASE 2F)O.I.H.G.S.X.
0.1514.1Contig10492_atAt1g65000--8e-31At1g20270oxidoreductase, 2OG-Fe(II) oxygenase family proteinO.I.H.G.S.X.
0.1514.1Contig11726_atAt1g65000--9e-10At4g33140unknown proteinO.I.H.G.S.X.
0.1514.1Contig14673_atAt1g65000--8e+0At5g35290unknown proteinO.I.H.G.S.X.
0.1412.9Contig1434_s_atAt1g65000--2e-1At5g58580ATL63 (ARABIDOPSIS TÓO.I.H.G.S.X.
0.1311.6Contig16579_atAt1g65000--2e+0At4g14695unknown proteinO.I.H.G.S.X.
0.119.4Contig16699_atAt1g65000--3e-1At1g33640unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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