Co-expression analysis

Gene ID Zm.9977.1.S1_at
Gene name hypothetical protein LOC100272895
Homology with ArabidopsisSimilar to At4g03520: ATHM2 (HF=8e+0)
Module size 6 genes
NF 0.14
%ile 9.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.93Zm.9977.1.S1_atAY108587.1hypothetical protein LOC100272895-8e+0At4g03520ATHM2O.I.H.G.S.X.
0.2724.60.94Zm.12374.1.S1_atBQ577812--3e+0At1g66800cinnamyl-alcohol dehydrogenase family / CAD familyO.I.H.G.S.X.
0.147.70.95Zm.2505.1.S1_atBG841722hypothetical protein LOC100216859-4e-5At1g44970peroxidase, putativeO.I.H.G.S.X.
0.094.00.96Zm.7937.1.A1_atBM080506plant viral-response family protein-1e+0At5g19140AILP1O.I.H.G.S.X.
0.083.40.95Zm.13665.1.S1_atAY107083.1--8e-4At4g01810protein transport protein-relatedO.I.H.G.S.X.
0.083.40.94Zm.4273.2.A1_atAI665197heat shock 70 kDa protein 4-3e-10At1g79920ATP bindingO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.498.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.498.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.498.5GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.898.5GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.598.4GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.998.3GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.798.3GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.598.3GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.398.2GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.997.3GSM253278ZM_8d_SG200_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.137765.1.S1_at, orthologous to the query gene, Zm.9977.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.7895.1PtpAffx.137765.1.S1_atAt4g03520hypothetical protein-1e-7At1g80490TPR1 (TOPLESS-RELATED 1)O.I.H.G.S.X.
0.4673.7PtpAffx.220067.1.S1_atAt4g03520hypothetical protein-3e-7At1g32340NHL8O.I.H.G.S.X.
0.4471.9Ptp.6930.1.S1_atAt4g03520hypothetical protein-2e-24At2g25970KH domain-containing proteinO.I.H.G.S.X.
0.4369.7PtpAffx.60077.1.S1_atAt4g03520--2e-30At3g10050OMR1 (L-O-METHYLTHREONINE RESISTANT 1)O.I.H.G.S.X.
0.4067.0PtpAffx.214251.1.S1_atAt4g03520hypothetical protein-0At5g25060RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.3964.6PtpAffx.205056.1.S1_atAt4g03520hypothetical protein-7e-10At1g08030unknown proteinO.I.H.G.S.X.
0.3863.7PtpAffx.162483.1.S1_atAt4g03520--1e+0At5g44010unknown proteinO.I.H.G.S.X.
0.3863.7PtpAffx.123605.1.S1_atAt4g03520hypothetical protein-9e-23At5g21010ATBPM5 (BTB-POZ and MATH domain 5)O.I.H.G.S.X.
0.3863.7PtpAffx.47813.1.S1_s_atAt4g03520hypothetical protein-9e-11At1g63170zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.3458.3PtpAffx.249.503.S1_s_atAt4g03520hypothetical protein-5e-121At1g15130hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.3052.0PtpAffx.222823.1.S1_atAt4g03520hypothetical protein-3e-13At2g03820nonsense-mediated mRNA decay NMD3 family proteinO.I.H.G.S.X.
0.2950.5Ptp.5258.1.S1_s_atAt4g03520hypothetical protein-3e-59At3g13460ECT2O.I.H.G.S.X.
0.2747.1PtpAffx.101685.1.A1_s_atAt4g03520hypothetical protein-7e-5At2g47330DEAD/DEAH box helicase, putativeO.I.H.G.S.X.
0.2747.1PtpAffx.109010.1.S1_s_atAt4g03520hypothetical protein-2e-13At1g15130hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.2645.2PtpAffx.143059.1.A1_atAt4g03520--5e-1At3g02200proteasome family proteinO.I.H.G.S.X.
0.2645.2PtpAffx.204503.1.S1_atAt4g03520hypothetical protein-2e-7At4g38440-O.I.H.G.S.X.
0.2034.6PtpAffx.213112.1.S1_atAt4g03520hypothetical protein-1e-20At3g02680NBS1 (NIJMEGEN BREAKAGE SYNDROME 1)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera



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