Co-expression analysis

Gene ID	Zm.9966.1.A1_at
Gene name	hypothetical protein LOC100191214
Homology with Arabidopsis	Similar to At2g32980: unknown protein (HF=1e-42)
Module size	6 genes
NF	0.31
%ile	29.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.55	71.6	0.94	Zm.9966.1.A1_at	AY107742.1	hypothetical protein LOC100191214	-	1e-42	At2g32980	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.94	ZmAffx.1068.1.S1_at	AI941684	Hypothetical protein LOC100192986	-	3e+0	At3g25719	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	55.7	0.94	Zm.13434.1.A1_at	AW562937	hypothetical protein LOC100192499	-	4e-12	At5g56090	COX15 (cytochrome c oxidase 15)	O.I.	H.G.	S.X.	Please select
0.22	16.9	0.94	Zm.19206.1.A1_at	BE552928	hypothetical protein LOC100274600	-	5e-8	At2g16860	GCIP-interacting family protein	O.I.	H.G.	S.X.	Please select
0.21	15.5	0.94	Zm.3090.1.S1_a_at	AY104155.1	hypothetical protein LOC100192770 /// USP family protein	-	2e-4	At4g27320	universal stress protein (USP) family protein	O.I.	H.G.	S.X.	Please select
0.18	11.6	0.94	Zm.17951.1.A1_at	CF630424	-	-	1e+0	At5g16790	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
20.4	99.3	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
18.7	99.2	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
18.6	99.2	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
18.2	99.2	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.3	99.0	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.8	99.0	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.0	98.4	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.7	98.3	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.5	98.3	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.4	96.2	GSM320457	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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