Co-expression analysis

Gene ID	Zm.9934.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At5g59740: UDP-galactose/UDP-glucose transporter-related (HF=2e+0)
Module size	7 genes
NF	0.41
%ile	47.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.55	71.6	0.97	Zm.9934.1.A1_at	BM332751	-	-	2e+0	At5g59740	UDP-galactose/UDP-glucose transporter-related	O.I.	H.G.	S.X.	Please select
0.59	76.1	0.97	Zm.1681.1.A1_at	CA403368	-	-	5e+0	At3g06070	unknown protein	O.I.	H.G.	S.X.	Please select
0.46	58.4	0.97	Zm.18110.1.S1_s_at	AY620409.1	arginine/serine-rich splicing factor 2 variant 2 /// arginine/serine-rich splicing factor 2 variant 3	-	3e-8	At3g61860	RSP31	O.I.	H.G.	S.X.	Please select
0.40	48.5	0.97	Zm.8901.1.A1_at	AY107832.1	hypothetical protein LOC100192580	-	9e-3	At3g11400	eukaryotic translation initiation factor 3G / eIF3g	O.I.	H.G.	S.X.	Please select
0.29	28.1	0.97	Zm.13813.1.S1_at	CF011226	hypothetical protein LOC100272771	-	7e-26	At3g61790	seven in absentia (SINA) family protein	O.I.	H.G.	S.X.	Please select
0.29	28.1	0.98	Zm.12269.1.A1_at	CF646230	hypothetical protein LOC100193070	-	7e+0	At3g14420	(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative	O.I.	H.G.	S.X.	Please select
0.27	24.6	0.97	Zm.6045.4.S1_at	AY105966.1	hypothetical protein LOC100191419	-	5e-4	At1g51200	zinc finger (AN1-like) family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.2	97.8	GSM202314	Mo17 19 day after pollination embryo tissue, biological replicate 2	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
7.0	97.7	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.7	97.2	GSM202319	Mo17 19 day after pollination embryo tissue, biological replicate 3	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
5.6	97.1	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.5	97.1	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.9	96.7	GSM202309	Mo17 19 day after pollination embryo tissue, biological replicate 1	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
4.6	96.4	GSM202316	Mo17xB73 19 day after pollination embryo tissue, biological replicate 2	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
4.0	95.8	GSM202324	Mo17xB73 19 day after pollination embryo tissue, biological replicate 3	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
3.7	95.4	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.5	95.1	GSM202310	B73 19 day after pollination embryo tissue, biological replicate 1	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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