Co-expression analysis

Gene ID	Zm.9890.1.A1_at
Gene name	XBAT32
Homology with Arabidopsis	Similar to At2g32300: UCC1 (UCLACYANIN 1) (HF=5e+0)
Module size	6 genes
NF	0.19
%ile	13.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.56	74.4	0.96	Zm.9890.1.A1_at	BM347924	XBAT32	-	5e+0	At2g32300	UCC1 (UCLACYANIN 1)	O.I.	H.G.	S.X.	Please select
0.36	41.3	0.98	Zm.4852.2.S1_at	AI770453	hypothetical protein LOC100192969	-	3e+0	At3g16300	integral membrane family protein	O.I.	H.G.	S.X.	Please select
0.17	10.6	0.97	Zm.2558.1.S1_at	CF011949	aldose reductase	-	5e-8	At2g37770	aldo/keto reductase family protein	O.I.	H.G.	S.X.	Please select
0.17	10.6	0.96	Zm.15899.2.A1_x_at	BM334937	hypothetical protein LOC100193182	-	5e-1	At1g56555	unknown protein	O.I.	H.G.	S.X.	Please select
0.17	10.6	0.96	Zm.1029.1.S1_at	BE640121	-	-	7e-1	At5g09460	transcription factor/ transcription regulator	O.I.	H.G.	S.X.	Please select
0.09	4.0	0.96	Zm.13656.1.S1_at	AY107165.1	-	-	8e-3	At1g24490	ALB4 (ALBINA 4)	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.9	96.7	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.4	96.2	GSM206310	Lower pulvinus 60 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
4.3	96.1	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.0	95.8	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.8	95.5	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.7	95.4	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.5	95.1	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.4	94.9	GSM202298	B73 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
3.4	94.9	GSM206288	Upper pulvinus 2 min total RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.3	94.7	GSM202304	B73 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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