| Gene ID | Zm.9879.2.S1_at |
| Gene name | vignain |
| Homology with Arabidopsis | Similar to At4g35350: XCP1 (XYLEM CYSTEINE PEPTIDASE 1) (HF=5e-5) |
| Module size | 6 genes |
| NF | 0.67 |
| %ile | 89.0 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.91 | 99.0 | 0.97 | Zm.9879.2.S1_at | CA404875 | vignain | - | 5e-5 | At4g35350 | XCP1 (XYLEM CYSTEINE PEPTIDASE 1) | O.I. | H.G. | S.X. | |
| 0.80 | 94.0 | 0.98 | Zm.16907.1.S1_at | AI691771 | - | - | 4e-50 | At3g18000 | XPL1 (XIPOTL 1) | O.I. | H.G. | S.X. | |
| 0.55 | 71.6 | 0.97 | Zm.2903.1.A1_at | CF019919 | hypothetical protein LOC100274564 | - | 9e-8 | At5g62000 | ARF2 (AUXIN RESPONSE FACTOR 2) | O.I. | H.G. | S.X. | |
| 0.50 | 65.7 | 0.97 | Zm.18323.1.A1_a_at | CO532638 | hypothetical protein LOC100193167 | - | 5e-1 | At4g27120 | unknown protein | O.I. | H.G. | S.X. | |
| 0.50 | 65.7 | 0.98 | Zm.19155.2.A1_x_at | CO526374 | - | - | 7e-9 | At4g23650 | CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6) | O.I. | H.G. | S.X. | |
| 0.43 | 52.8 | 0.97 | Zm.4434.1.S1_at | CA402082 | - | - | 2e+0 | At4g10925 | F-box family protein | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 7.0 | 97.7 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 6.6 | 97.6 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 6.5 | 97.5 | GSM320452 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 6.4 | 97.5 | GSM320450 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 6.1 | 97.4 | GSM320451 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.9 | 97.3 | GSM320449 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.4 | 97.0 | GSM320448 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.1 | 96.8 | GSM320454 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 3.8 | 95.5 | GSM320447 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 2.8 | 93.5 | GSM206313 | Upper pulvinus 5 min total RNA biorep 2 | GSE8320 | Transcriptional and translational gene regulation in the maize pulvinus | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.83 | 95.8 | Os08g0556900 | At4g35350 | - | Cysteine proteinase (EC 3.4.22.-) | 1e-2 | At5g50260 | cysteine proteinase, putative | O.I. | H.G. | S.X. | |
| 0.83 | 95.8 | Os03g0370400 | At4g35350 | - | Protein of unknown function DUF679 family protein | 1e-1 | At5g27370 | unknown protein | O.I. | H.G. | S.X. | |
| 0.60 | 79.7 | Os11g0134700 | At4g35350 | - | Latex-abundant protein | 3e+0 | At3g06790 | plastid developmental protein DAG, putative | O.I. | H.G. | S.X. | |
| 0.50 | 68.0 | Os02g0114200 | At4g35350 | - | Serine carboxypeptidase III precursor (EC3.4.16.5) | 3e-10 | At3g45010 | scpl48 (serine carboxypeptidase-like 48) | O.I. | H.G. | S.X. | |
| 0.44 | 58.1 | Os07g0679300 | At4g35350 | - | Alpha-galactosidase precursor (EC 3.2.1.22)(Melibiase) (Alpha-D- galactoside galactohydrolase) | 6e-54 | At3g56310 | alpha-galactosidase, putative / melibiase, putative / alpha-D-galactoside galactohydrolase, putative | O.I. | H.G. | S.X. | |
| 0.12 | 7.2 | Os04g0311400 | At4g35350 | - | Cysteine proteinase 1 precursor (EC 3.4.22.-) | 3e-13 | At4g39090 | RD19 (RESPONSIVE TO DEHYDRATION 19) | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
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