Co-expression analysis

Gene ID	Zm.9848.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At5g23640: unknown protein (HF=1e+0)
Module size	6 genes
NF	0.02
%ile	0.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.0	0.96	Zm.9848.1.A1_at	BM341075	-	-	1e+0	At5g23640	unknown protein	O.I.	H.G.	S.X.	Please select
0.04	1.5	0.98	Zm.701.1.A1_a_at	CA403934	26S proteasome non-ATPase regulatory subunit 3 /// 26S proteasome non-ATPase regulatory subunit 3	-	2e-8	At1g75990	26S proteasome regulatory subunit S3, putative (RPN3)	O.I.	H.G.	S.X.	Please select
0.04	1.5	0.96	Zm.16958.3.S1_at	CO528527	-	-	4e+0	At2g29263	unknown protein	O.I.	H.G.	S.X.	Please select
0.01	0.3	0.98	Zm.2313.1.S1_at	CF625540	-	-	4e-1	At1g31160	zinc-binding protein, putative / protein kinase C inhibitor, putative	O.I.	H.G.	S.X.	Please select
0.01	0.3	0.97	Zm.9947.1.A1_at	BM349454	hypothetical protein LOC100278924	-	9e-2	At3g02160	DNA binding	O.I.	H.G.	S.X.	Please select
0.01	0.3	0.97	Zm.10563.1.S1_at	CF007885	hypothetical protein LOC100193826	-	3e-6	At3g10850	GLY2	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
19.5	99.3	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.2	99.3	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.7	99.1	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.2	98.8	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.4	98.7	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.9	98.6	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.9	98.6	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.4	98.5	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.8	98.5	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.9	93.8	GSM320464	protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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