Co-expression analysis

Gene ID Zm.9845.1.S1_at
Gene name hypothetical protein LOC100272820
Homology with ArabidopsisSimilar to At4g33730: pathogenesis-related protein, putative (HF=6e-3)
Module size 14 genes
NF 0.74
%ile 94.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5674.40.95Zm.9845.1.S1_atBM379918hypothetical protein LOC100272820-6e-3At4g33730pathogenesis-related protein, putativeO.I.H.G.S.X.
0.8696.30.96Zm.5624.1.A1_atCO534105hypothetical protein LOC100279553-4e-29At5g13280AK-LYS1 (ASPARTATE KINASE 1)O.I.H.G.S.X.
0.8395.60.97Zm.3179.1.S1_atCO518092hypothetical protein LOC100272487-2e-29At3g04500RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.8395.60.97Zm.7385.1.A1_atCF626198--7e+0At5g19473-O.I.H.G.S.X.
0.8194.30.97Zm.7380.1.S1_atBM078135hypothetical protein LOC100280093-6e-1At1g51070basic helix-loop-helix (bHLH) family proteinO.I.H.G.S.X.
0.8094.00.97Zm.3157.4.A1_atAI734519--5e-1At1g09220pentatricopeptide (PPR) repeat-containing proteinO.I.H.G.S.X.
0.7188.20.96Zm.3207.1.A1_atBE553061hypothetical protein LOC100191840-6e+0At5g62900unknown proteinO.I.H.G.S.X.
0.7188.20.96Zm.4810.1.A1_atAI745785--5e+0At3g60390HAT3 (HOMEOBOX-LEUCINE ZIPPER PROTEIN 3)O.I.H.G.S.X.
0.7188.20.96Zm.481.1.S1_atAF227632.1mismatch binding protein Mus3-2e-8At4g02070MSH6 (MUTS HOMOLOG 6)O.I.H.G.S.X.
0.6986.50.97Zm.5026.1.A1_atAI600450--4e+0At5g63740zinc finger protein-relatedO.I.H.G.S.X.
0.6986.50.97Zm.675.2.S1_atAF332178.1beta-expansin 5-3e-1At4g19270unknown proteinO.I.H.G.S.X.
0.6986.50.97Zm.5024.1.S1_atAY111429.1--4e+0At3g27210unknown proteinO.I.H.G.S.X.
0.6582.10.97Zm.4793.3.A1_a_atCD995492hypothetical protein LOC100193376-5e-3At3g10860ubiquinol-cytochrome C reductase complex ubiquinone-binding protein, putative / ubiquinol-cytochrome C reductase complex 8.2 kDa protein, putativeO.I.H.G.S.X.
0.6179.50.97Zm.15923.1.S1_x_atCF636877--8e-24At1g22840CYTC-1 (CYTOCHROME C-1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.499.0GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.898.9GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.398.9GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.398.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.398.8GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.098.6GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.798.6GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.698.4GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.098.2GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.397.8GSM162266Wild type 2 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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