Co-expression analysis

Gene ID Zm.9756.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At5g38800: AtbZIP43 (Arabidopsis thaliana basic leucine-zipper 43) (HF=5e+0)
Module size 16 genes
NF 0.38
%ile 41.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7792.10.93Zm.9756.1.A1_atBM338065--5e+0At5g38800AtbZIP43 (Arabidopsis thaliana basic leucine-zipper 43)O.I.H.G.S.X.
0.5775.10.94Zm.10252.1.A1_atAY108029.1hypothetical protein LOC100279693-2e+0At5g02750zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.5571.60.97ZmAffx.937.1.S1_atAI820257--8e+0At4g19620unknown proteinO.I.H.G.S.X.
0.4861.30.94Zm.5976.2.S1_x_atBG265782--3e+0At5g4008060S ribosomal protein-relatedO.I.H.G.S.X.
0.4658.40.95Zm.12480.1.A1_atAI901944hypothetical protein LOC100194202-4e-1At4g15393CYP702A5O.I.H.G.S.X.
0.4658.40.95ZmAffx.144.1.S1_atAI667795--8e-1At3g57390AGL18O.I.H.G.S.X.
0.4455.70.96ZmAffx.138.1.S1_atAI667759--3e+0At1g66510AAR2 protein familyO.I.H.G.S.X.
0.3641.30.97ZmAffx.172.1.A1_atAI668238--3e+0Atmg00240-O.I.H.G.S.X.
0.3233.40.97ZmAffx.147.1.S1_atAI667831Hypothetical protein LOC100192026-3e+0At2g20260PSAE-2 (photosystem I subunit E-2)O.I.H.G.S.X.
0.3233.40.95Zm.10401.1.S1_atCO524902glyoxylate reductase-3e-12At1g79870oxidoreductase family proteinO.I.H.G.S.X.
0.3233.40.94ZmAffx.1056.1.A1_atAI881906--3e+0At1g31370-O.I.H.G.S.X.
0.3131.60.94Zm.1039.2.A1_atCF384547--2e+0At3g59270syntaxin-related family proteinO.I.H.G.S.X.
0.3131.60.97Zm.4250.1.A1_atT18710autophagy-related 3-8e-13At5g61500ATG3O.I.H.G.S.X.
0.2622.70.94ZmAffx.54.1.S1_atAI665038--5e-2At3g20610non-race specific disease resistance protein, putativeO.I.H.G.S.X.
0.2622.70.94Zm.9319.1.A1_atCF627080hypothetical protein LOC100216855-2e+0At5g10000ATFD4 (ferredoxin 4)O.I.H.G.S.X.
0.2622.70.97ZmAffx.830.1.S1_atAI770534--6e+0At5g40930TOM20-4 (TRANSLOCASE OF OUTER MEMBRANE 20-4)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
16.499.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.799.0GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.699.0GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.798.9GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.498.8GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.498.8GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.798.7GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.998.5GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.998.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.094.0GSM202298B73 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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