Co-expression analysis

Gene ID Zm.9749.1.S1_a_at
Gene name
Homology with ArabidopsisSimilar to At1g02850: BGLU11 (BETA GLUCOSIDASE 11) (HF=3e+0)
Module size 11 genes
NF 0.37
%ile 40.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7188.20.97Zm.9749.1.S1_a_atCO521810--3e+0At1g02850BGLU11 (BETA GLUCOSIDASE 11)O.I.H.G.S.X.
0.6179.50.97Zm.326.1.S1_atAB042269.1response regulator 7-3e+0At5g41761unknown proteinO.I.H.G.S.X.
0.4048.50.97Zm.520.1.S1_x_atAF200528.1cellulose synthase-4-2e-74At5g05170CEV1 (CONSTITUTIVE EXPRESSION OF VSP 1)O.I.H.G.S.X.
0.3844.20.97Zm.16794.1.A1_atAF330034.1isopentenyl pyrophosphate isomerase-7e-35At5g16440IPP1 (ISOPENTENYL DIPHOSPHATE ISOMERASE 1)O.I.H.G.S.X.
0.3742.30.98Zm.14115.1.A1_atAY104533.1hypothetical protein LOC100278990-2e+0At5g19750peroxisomal membrane 22 kDa family proteinO.I.H.G.S.X.
0.3336.00.97Zm.16829.3.S1_atAY111089.1--4e+0At5g55240caleosin-related family protein / embryo-specific protein, putativeO.I.H.G.S.X.
0.3029.80.97Zm.2959.1.S1_atCA403221hypothetical protein LOC100279493-7e-1At5g18970AWPM-19-like membrane family proteinO.I.H.G.S.X.
0.2928.10.97Zm.4182.1.S1_atCF631780hypothetical protein LOC100276027-1e-4At5g54855pollen Ole e 1 allergen and extensin family proteinO.I.H.G.S.X.
0.2928.10.98Zm.2631.1.S1_atAY107698.1hypothetical protein LOC100191885-5e-5At2g21730CAD2 (CINNAMYL ALCOHOL DEHYDROGENASE HOMOLOG 2)O.I.H.G.S.X.
0.2724.60.97Zm.12992.1.A1_atCA402979--2e+0At3g17365catalytic/ methyltransferaseO.I.H.G.S.X.
0.2419.80.98Zm.12236.1.A1_atCA830514hypothetical protein LOC100194199-5e+0At3g13970APG12B (AUTOPHAGY 12 B)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.198.5GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.098.5GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.898.5GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.498.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.398.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.098.4GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.498.3GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.398.0GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.398.0GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.194.3GSM320443protocol: mRNA - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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