Co-expression analysis

Gene ID Zm.9745.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At5g24570: unknown protein (HF=2e+1)
Module size 6 genes
NF 0.62
%ile 83.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5775.10.94Zm.9745.1.A1_atBM341408--2e+1At5g24570unknown proteinO.I.H.G.S.X.
0.7389.90.95Zm.652.1.S1_atAY029559.1methyl binding domain-2e-1At5g17870PSRP6 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 6)O.I.H.G.S.X.
0.6785.80.94Zm.1079.6.A1_atCF634247carbonic anhydrase-5e-1At1g56550UDP-xylosyltransferaseO.I.H.G.S.X.
0.6785.80.95Zm.6364.1.S1_atT20372--8e-1At2g22060-O.I.H.G.S.X.
0.4759.90.94Zm.15780.1.A1_atCD484576--4e+0At3g01472CPuORF33 (Conserved peptide upstream open reading frame 33)O.I.H.G.S.X.
0.4759.90.94Zm.19028.1.S1_atT18786hypothetical protein LOC100192863-4e-2At4g19270unknown proteinO.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6381.10.92Zm.10002.1.A1_a_atBM351261--2e+0At1g67060unknown proteinO.I.H.G.S.X.
0.6077.80.87Zm.1330.1.S1_atAY104880.1hypothetical protein LOC100272442-4e-2At4g31580SRZ-22O.I.H.G.S.X.
0.6077.80.87ZmAffx.328.1.S1_atAI670510--3e+0At3g07510unknown proteinO.I.H.G.S.X.
0.5775.10.89Zm.18266.1.S1_atAJ507106.1zinc ribbon 1-9e-5At1g68730zinc finger (DNL type) family proteinO.I.H.G.S.X.
0.5571.60.92Zm.957.2.A1_atCB381158prefoldin subunit 6-1e-1At2g35430zinc finger (CCCH-type) family proteinO.I.H.G.S.X.
0.5065.70.89ZmAffx.657.2.A1_atAI715078--5e+0At1g15180MATE efflux family proteinO.I.H.G.S.X.
0.5065.70.90ZmAffx.255.1.A1_atAI670293--6e-2At2g05510glycine-rich proteinO.I.H.G.S.X.
0.4861.30.93Zm.12152.1.S1_atCK394699hypothetical protein LOC100274505-1e-5At1g63120ATRBL2 (Arabidopsis thaliana Rhomboid-like 2)O.I.H.G.S.X.
0.4759.90.94Zm.9088.1.A1_atCB350848--1e+0At2g06908unknown proteinO.I.H.G.S.X.
0.4658.40.86ZmAffx.274.1.S1_atAI670402--8e-1At1g51230-O.I.H.G.S.X.
0.4455.70.92Zm.889.2.S1_atCD439290--4e-20At4g38740ROC1 (ROTAMASE CYP 1)O.I.H.G.S.X.
0.4455.70.95ZmAffx.1521.1.S1_at11990232-58--1e-70Atcg00790-O.I.H.G.S.X.
0.4455.70.90Zm.3757.1.A1_atCB351276ferredoxin-3-1e+0At4g00670DNA bindingO.I.H.G.S.X.
0.4352.80.84ZmAffx.257.1.A1_atAI670300--8e-1At5g66090unknown proteinO.I.H.G.S.X.
0.4048.50.85ZmAffx.247.1.S1_atAI670259--8e-1At1g21830unknown proteinO.I.H.G.S.X.
0.4048.50.90ZmAffx.19.1.S1_atAI586648--1e+1At1g48745unknown proteinO.I.H.G.S.X.
0.4048.50.90Zm.9653.1.A1_atBM335707--7e-2At5g23170protein kinase family proteinO.I.H.G.S.X.
0.3742.30.92Zm.16892.1.A1_atCO520304calmodulin binding protein-2e-2At3g22190IQD5 (IQ-domain 5)O.I.H.G.S.X.
0.3641.30.85Zm.15352.1.A1_x_atCF627435hypothetical protein LOC100279011-2e-1At3g09590pathogenesis-related protein, putativeO.I.H.G.S.X.
0.3641.30.86ZmAffx.429.1.S1_atAI676885--8e-1At5g20150SPX1 (SPX DOMAIN GENE 1)O.I.H.G.S.X.
0.3641.30.88Zm.17208.1.S1_atAY111900.1Hypothetical protein LOC100193862-3e-2At5g38895zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.3641.30.91Zm.3301.1.S1_atBG842863hypothetical protein LOC100216845-7e-25At5g26030FC1 (ferrochelatase 1)O.I.H.G.S.X.
0.3641.30.92Zm.15448.1.S1_atCD448349plastidic phosphate translocator-like protein1-4e-24At4g32390phosphate translocator-relatedO.I.H.G.S.X.
0.3641.30.83ZmAffx.659.1.S1_atAI715087--3e+0At1g74430MYB95 (myb domain protein 95)O.I.H.G.S.X.
0.3641.30.93Zm.2165.1.A1_atBM072875hypothetical protein LOC100278701-6e+0At5g25390SHN2 (shine2)O.I.H.G.S.X.
0.3336.00.86ZmAffx.636.1.S1_atAI715064--3e+0At2g01505CLE16 (CLAVATA3/ESR-RELATED 16)O.I.H.G.S.X.
0.3336.00.86ZmAffx.250.1.A1_atAI670264--3e+0At4g34730ribosome-binding factor A family proteinO.I.H.G.S.X.
0.3233.40.85ZmAffx.1119.1.S1_atAW267407--3e+0At4g33625unknown proteinO.I.H.G.S.X.
0.3233.40.87ZmAffx.448.1.S1_atAI677105Hexokinase-3e+0At4g29130HXK1 (HEXOKINASE 1)O.I.H.G.S.X.
0.3131.60.85ZmAffx.352.1.S1_x_atAI670499--3e+0At2g01505CLE16 (CLAVATA3/ESR-RELATED 16)O.I.H.G.S.X.
0.2928.10.86Zm.476.1.S1_atAF003551.2lysine-ketoglutarate reductase/saccharopine dehydr-3e-8At4g33150lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzymeO.I.H.G.S.X.
0.2928.10.92Zm.8383.1.A1_atBM078678PCO062666 protein-4e-1At5g47960ATRABA4CO.I.H.G.S.X.
0.2928.10.90Zm.15807.1.A1_atAY111212.1--1e+0At4g19590DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.
0.2928.10.85ZmAffx.366.1.S1_atAI673846--5e+0At3g63350AT-HSFA7BO.I.H.G.S.X.
0.2928.10.85Zm.3344.1.A1_atCD964900--4e-1At5g05987PRA1.A2 (PRENYLATED RAB ACCEPTOR 1.A2)O.I.H.G.S.X.
0.2828.10.87ZmAffx.1156.1.S1_s_atAW433382--1e-131Atcg00340-O.I.H.G.S.X.
0.2828.10.86ZmAffx.421.1.S1_atAI676853--3e+0At3g28950avirulence-responsive protein-related / avirulence induced gene (AIG) protein-relatedO.I.H.G.S.X.
0.2724.60.83ZmAffx.639.1.A1_atAI715067--3e+0At3g13780-O.I.H.G.S.X.
0.2724.60.83ZmAffx.678.1.A1_atAI734611--7e-2At3g09162unknown proteinO.I.H.G.S.X.
0.2724.60.85Zm.13456.1.S1_x_atAY109199.1hypothetical protein LOC100194201-2e+0At5g49280hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.2724.60.87Zm.654.1.A1_atAY029561.1hypothetical LOC542071-1e-3At5g35330MBD02 (METHYL-CPG-BINDING DOMAIN PROTEIN 02)O.I.H.G.S.X.
0.2724.60.89Zm.1818.1.S1_a_atBM073458hypothetical protein LOC100194358-5e+0At5g48545histidine triad family protein / HIT family proteinO.I.H.G.S.X.
0.2724.60.89Zm.16502.5.A1_atAI586439hypothetical protein LOC100280237-1e-12At5g61780tudor domain-containing protein / nuclease family proteinO.I.H.G.S.X.
0.2521.30.82ZmAffx.621.1.S1_atAI715049--3e+0At2g41070EEL (ENHANCED EM LEVEL)O.I.H.G.S.X.
0.2521.30.87ZmAffx.311.1.A1_atAI670448--2e-1At3g48208-O.I.H.G.S.X.


Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.798.9GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.198.7GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.098.7GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.998.2GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.498.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.597.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.297.8GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.097.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.997.7GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.296.9GSM162267Mutant 1 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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