Co-expression analysis

Gene ID Zm.9712.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At5g25810: tny (TINY) (HF=9e-2)
Module size 9 genes
NF 0.14
%ile 8.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6077.80.93Zm.9712.1.A1_atBM336467--9e-2At5g25810tny (TINY)O.I.H.G.S.X.
0.4048.50.95Zm.8293.1.S1_atCF626174harpin-induced protein-7e-1At1g74560NRP1 (NAP1-RELATED PROTEIN 1)O.I.H.G.S.X.
0.3233.40.95Zm.8292.1.S1_atAY106611.1hypothetical protein LOC100275334-6e-15At4g16450unknown proteinO.I.H.G.S.X.
0.169.40.95Zm.1039.2.A1_atCF384547--2e+0At3g59270syntaxin-related family proteinO.I.H.G.S.X.
0.158.60.96Zm.9804.1.A1_atCD956095--4e+0At3g2223060S ribosomal protein L27 (RPL27B)O.I.H.G.S.X.
0.158.60.94Zm.9405.1.A1_atBM336416--1e-1At1g54970ATPRP1 (PROLINE-RICH PROTEIN 1)O.I.H.G.S.X.
0.136.80.95Zm.13559.2.A1_a_atBM333883--5e+0At4g23380unknown proteinO.I.H.G.S.X.
0.104.60.95ZmAffx.1033.1.A1_atAI881710--8e-1At1g12064unknown proteinO.I.H.G.S.X.
0.051.90.94Zm.8772.1.A1_atCF018678hypothetical protein LOC100192757-2e-38At5g54080HGO (HOMOGENTISATE 1,2-DIOXYGENASE)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
21.699.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
18.699.2GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
17.099.1GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.599.0GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.899.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.298.9GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.798.9GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.298.6GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.798.5GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.296.0GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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