Co-expression analysis

Gene ID	Zm.9703.1.A1_at
Gene name	hypothetical protein LOC100191161 /// hypothetical protein LOC100272965
Homology with Arabidopsis	Similar to Atcg01020: - (HF=5e+0)
Module size	6 genes
NF	0.29
%ile	26.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.57	75.1	0.91	Zm.9703.1.A1_at	BM348340	hypothetical protein LOC100191161 /// hypothetical protein LOC100272965	-	5e+0	Atcg01020	-	O.I.	H.G.	S.X.	Please select
0.73	89.9	0.91	Zm.6684.1.S1_a_at	CF019431	60S ribosomal protein L29	-	4e-19	At3g06700	60S ribosomal protein L29 (RPL29A)	O.I.	H.G.	S.X.	Please select
0.63	81.1	0.91	Zm.11664.2.A1_a_at	CF628142	hypothetical protein LOC100278684	-	1e+0	At5g06030	self-incompatibility protein-related	O.I.	H.G.	S.X.	Please select
0.29	28.1	0.92	Zm.5755.1.A1_at	AI834089	-	-	2e-4	At1g30820	CTP synthase, putative / UTP--ammonia ligase, putative	O.I.	H.G.	S.X.	Please select
0.25	21.3	0.92	Zm.11802.2.A1_at	BM380871	-	-	1e+0	At5g25940	early nodulin-related	O.I.	H.G.	S.X.	Please select
0.12	5.9	0.91	Zm.17082.1.S1_s_at	AY108221.1	-	-	4e-12	At4g23650	CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
10.9	98.5	GSM320467	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.5	98.1	GSM320471	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.8	97.9	GSM205421	B73 19 DAP endosperm tissue biological replicate 1	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
7.0	97.7	GSM205423	B73xMo17 19 DAP endosperm tissue biological replicate 1	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
6.9	97.7	GSM205436	B73xMo17 19 DAP endosperm tissue biological replicate 3	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
6.9	97.7	GSM205429	B73xMo17 19 DAP endosperm tissue biological replicate 2	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
6.6	97.6	GSM205425	B73 19 DAP endosperm tissue biological replicate 2	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
6.1	97.4	GSM205433	B73 19 DAP endosperm tissue biological replicate 3	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
4.5	96.3	GSM205368	B73xMo17 13 DAP endosperm tissue biological replicate 1	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
4.1	95.9	GSM205372	B73xMo17 13 DAP endosperm tissue biological replicate 2	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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