Co-expression analysis

Gene ID Zm.97.1.S1_at
Gene name Eukaryotic initiation factor-5
Homology with ArabidopsisSimilar to At1g36730: eukaryotic translation initiation factor 5, putative / eIF-5, putative (HF=1e-24)
Module size 6 genes
NF 0.10
%ile 6.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5674.40.91Zm.97.1.S1_atBM073786Eukaryotic initiation factor-5-1e-24At1g36730eukaryotic translation initiation factor 5, putative / eIF-5, putativeO.I.H.G.S.X.
0.3131.60.92Zm.113.1.A1_atAY109382.1homeobox3-3e+0At3g19510HAT3.1O.I.H.G.S.X.
0.115.30.91Zm.16377.1.A1_atCF349080--2e+0At3g20555unknown proteinO.I.H.G.S.X.
0.094.00.91Zm.9351.1.A1_a_atCF630860transport protein particle component, Bet3 containing protein /// transport protein particle component, Bet3 containing protein /// transport protein particle component, Bet3 containing protein-4e-20At3g05000transport protein particle (TRAPP) component Bet3 family proteinO.I.H.G.S.X.
0.083.40.91Zm.9425.2.A1_x_atBM350860hypothetical protein LOC100274829-9e-1At2g35430zinc finger (CCCH-type) family proteinO.I.H.G.S.X.
0.051.90.91Zm.2821.1.A1_s_atBM351274hypothetical protein LOC100278693-2e+0At2g28510Dof-type zinc finger domain-containing proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.997.7GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.597.5GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.297.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.197.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.997.3GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.897.2GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.897.2GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.697.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.096.7GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.696.4GSM253282ZM_8d_SG200_3Alu_IIIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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