Co-expression analysis

Gene ID Zm.963.1.S1_at
Gene name hypothetical protein LOC100273769
Homology with ArabidopsisSimilar to At5g58220: TTL (Transthyretin-Like protein) (HF=4e-5)
Module size 7 genes
NF 0.23
%ile 17.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6077.80.96Zm.963.1.S1_atAY105204.1hypothetical protein LOC100273769-4e-5At5g58220TTL (Transthyretin-Like protein)O.I.H.G.S.X.
0.5065.70.97Zm.4435.1.A1_atAI691606hypothetical protein LOC100278906-3e-2At4g17900zinc-binding family proteinO.I.H.G.S.X.
0.4352.80.97Zm.4439.1.A1_s_atCA404865--2e+1Atmg01240-O.I.H.G.S.X.
0.3336.00.97Zm.8005.1.A1_atCF243925hypothetical protein LOC100279810-4e-1At5g55125unknown proteinO.I.H.G.S.X.
0.169.40.98Zm.6475.3.S1_atAI737301PHD finger protein-3e-18At2g02470AL6 (ALFIN-LIKE 6)O.I.H.G.S.X.
0.115.30.97Zm.5352.1.A1_atBU079827zinc finger, C3HC4 type family protein /// 3-isopropylmalate dehydrogenase 2-3e-53At5g142003-isopropylmalate dehydrogenase, chloroplast, putativeO.I.H.G.S.X.
0.104.60.97Zm.3692.1.A1_atBM332777hypothetical protein LOC100278289-7e+0At4g26670mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.998.7GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.798.7GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.798.3GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.097.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.997.7GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.797.6GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.497.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.897.2GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.897.2GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
1.888.9GSM253280ZM_8d_SG200_3Alu_IGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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