Co-expression analysis

Gene ID Zm.9621.1.A1_at
Gene name ethylene-responsive transcription factor 3
Homology with ArabidopsisSimilar to At1g69490: NAP (NAC-like, activated by AP3/PI) (HF=4e+0)
Module size 6 genes
NF 0.48
%ile 61.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8395.60.97Zm.9621.1.A1_atBM333959ethylene-responsive transcription factor 3-4e+0At1g69490NAP (NAC-like, activated by AP3/PI)O.I.H.G.S.X.
0.9199.00.97Zm.947.1.A1_atBF733123--2e-2At3g17180scpl33 (serine carboxypeptidase-like 33)O.I.H.G.S.X.
0.7188.20.97Zm.9620.1.A1_atCA403653alginate regulatory protein AlgP-2e+0At1g11850unknown proteinO.I.H.G.S.X.
0.5065.70.98Zm.11836.1.A1_s_atBM381136hypothetical protein LOC100193763-3e-1At1g52470hydrolaseO.I.H.G.S.X.
0.3233.40.98Zm.9117.1.A1_atCF636944hypothetical protein LOC100274722-4e-1At1g71865unknown proteinO.I.H.G.S.X.
0.136.80.98Zm.9333.1.A1_atBM347779--1e+0At3g58720zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.799.0GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.698.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.798.6GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.798.3GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.498.3GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.398.2GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.598.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.098.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.697.9GSM385709Deep-sowing 10d treatment TIBA, biological rep1GSE15371Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowingLink to GEO
6.797.6GSM385710Deep-sowing 10d treatment TIBA, biological rep2GSE15371Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowingLink to GEO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.44721.1.A1_at, orthologous to the query gene, Zm.9621.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.7493.8PtpAffx.44721.1.A1_atAt1g69490hypothetical protein-3e-7At4g36980unknown proteinO.I.H.G.S.X.
0.4369.7PtpAffx.154761.1.S1_atAt1g69490GRAS family transcription factor-1e-7At4g00150scarecrow-like transcription factor 6 (SCL6)O.I.H.G.S.X.
0.4167.7PtpAffx.107951.1.A1_s_atAt1g69490hypothetical protein-3e-1At3g17626-O.I.H.G.S.X.
0.3762.3PtpAffx.106245.1.A1_atAt1g69490hypothetical protein-5e-3At5g52500unknown proteinO.I.H.G.S.X.
0.3559.7PtpAffx.217285.1.S1_atAt1g69490hypothetical protein-5e-2At3g56420-O.I.H.G.S.X.
0.3357.5PtpAffx.78969.1.S1_atAt1g69490hypothetical protein-1e-6At1g02145transferase, transferring glycosyl groupsO.I.H.G.S.X.
0.3052.0PtpAffx.204470.1.S1_atAt1g69490tRNA isopentenyltransferase-3e-6At2g27760ATIPT2 (TRNA ISOPENTENYLTRANSFERASE 2)O.I.H.G.S.X.
0.2950.5PtpAffx.213124.1.S1_atAt1g69490hypothetical protein-1e-5At5g55600agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing proteinO.I.H.G.S.X.
0.2950.5PtpAffx.206181.1.S1_atAt1g69490hypothetical protein-2e-18At3g28430unknown proteinO.I.H.G.S.X.
0.2850.5PtpAffx.207427.1.S1_atAt1g69490hypothetical protein-5e-29At5g65685soluble glycogen synthase-relatedO.I.H.G.S.X.
0.2645.2PtpAffx.158988.1.S1_atAt1g69490hypothetical protein-7e-9At1g79600ABC1 family proteinO.I.H.G.S.X.
0.2543.6PtpAffx.36421.1.S1_atAt1g69490hypothetical protein-1e-102At5g45030catalyticO.I.H.G.S.X.
0.2034.6PtpAffx.202684.1.S1_atAt1g69490AP2 domain-containing transcription factor-6e-11At4g13040AP2 domain-containing transcription factor family proteinO.I.H.G.S.X.
0.1932.7PtpAffx.217786.1.S1_atAt1g69490hypothetical protein-1e-13At3g04160unknown proteinO.I.H.G.S.X.
0.1830.8PtpAffx.152711.1.S1_atAt1g69490GRAS family transcription factor /// GRAS family transcription factor /// GRAS family transcription factor-1e-4At4g00150scarecrow-like transcription factor 6 (SCL6)O.I.H.G.S.X.
0.1830.8PtpAffx.249.450.S1_atAt1g69490hypothetical protein-1e+0At1g52590-O.I.H.G.S.X.
0.1729.1PtpAffx.203291.1.S1_atAt1g69490hypothetical protein-1e-13At4g11110SPA2 (SPA1-RELATED 2)O.I.H.G.S.X.
0.1729.1PtpAffx.201263.1.S1_atAt1g69490hypothetical protein-4e-3At5g55390EDM2O.I.H.G.S.X.
0.1321.6PtpAffx.137161.1.S1_atAt1g69490hypothetical protein-1e-16At1g63370flavin-containing monooxygenase family protein / FMO family proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera



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