| Gene ID | Zm.9590.1.A1_at |
| Gene name | |
| Homology with Arabidopsis | Similar to At1g75220: integral membrane protein, putative (HF=6e-1) |
| Module size | 6 genes |
| NF | 0.69 |
| %ile | 90.7 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.67 | 85.8 | 0.94 | Zm.9590.1.A1_at | CK986177 | - | - | 6e-1 | At1g75220 | integral membrane protein, putative | O.I. | H.G. | S.X. | |
| 0.80 | 94.0 | 0.94 | Zm.8828.1.A1_at | BM075809 | hypothetical protein LOC100191533 | - | 1e+0 | At3g63095 | - | O.I. | H.G. | S.X. | |
| 0.73 | 89.9 | 0.95 | Zm.10740.1.S1_a_at | CO520864 | non-cyanogenic beta-glucosidase | - | 1e-2 | At3g60130 | BGLU16 (BETA GLUCOSIDASE 16) | O.I. | H.G. | S.X. | |
| 0.67 | 85.8 | 0.94 | Zm.2620.1.A1_at | AW066552 | - | - | 3e-8 | At3g12980 | HAC5 | O.I. | H.G. | S.X. | |
| 0.50 | 65.7 | 0.93 | Zm.818.2.S1_at | CO531833 | hypothetical protein LOC100216560 | - | 1e+1 | At5g67490 | unknown protein | O.I. | H.G. | S.X. | |
| 0.46 | 58.4 | 0.94 | Zm.16938.1.A1_at | AY108209.1 | - | - | 3e+0 | At4g28485 | unknown protein | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 17.3 | 99.1 | GSM320447 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 16.8 | 99.1 | GSM320448 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 14.7 | 98.9 | GSM320449 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 9.9 | 98.3 | GSM320450 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 9.6 | 98.3 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 8.7 | 98.1 | GSM320451 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 8.7 | 98.1 | GSM320452 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 8.6 | 98.1 | GSM320454 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 8.4 | 98.1 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 2.9 | 93.8 | GSM320457 | protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.70 | 88.4 | Os05g0567800 | At1g75220 | - | Integral membrane protein | 3e-6 | At1g75220 | integral membrane protein, putative | O.I. | H.G. | S.X. | |
| 0.37 | 45.0 | Os05g0444300 | At1g75220 | - | Eukaryotic protein of unknown function DUF914family protein | 3e+0 | At5g50840 | - | O.I. | H.G. | S.X. | |
| 0.29 | 31.1 | Os02g0558100 | At1g75220 | - | Chloride channel (Fragment) | 8e-18 | At5g49890 | CLC-C (CHLORIDE CHANNEL C) | O.I. | H.G. | S.X. | |
| 0.25 | 24.1 | Os08g0300300 | At1g75220 | - | C1C-Nt1 protein | 1e+0 | At5g66815 | unknown protein | O.I. | H.G. | S.X. | |
| 0.25 | 24.1 | Os03g0215000 | At1g75220 | - | Conserved hypothetical protein | 6e-14 | At1g76340 | integral membrane family protein | O.I. | H.G. | S.X. | |
| 0.23 | 21.2 | Os03g0720300 | At1g75220 | - | Glutamate decarboxylase isozyme 1 (EC 4.1.1.15) | 7e-76 | At5g17330 | GAD | O.I. | H.G. | S.X. | |
| 0.19 | 15.1 | Os03g0132000 | At1g75220 | - | 4-coumarate-CoA ligase-like protein | 2e-5 | At1g20490 | AMP-dependent synthetase and ligase family protein | O.I. | H.G. | S.X. | |
| 0.12 | 7.2 | Os04g0553800 | At1g75220 | - | Glycosyl transferase, family 8 protein | 8e-14 | At2g35710 | glycogenin glucosyltransferase (glycogenin)-related | O.I. | H.G. | S.X. | |
| 0.07 | 3.7 | Os04g0498200 | At1g75220 | - | Cytochrome c oxidase subunit 6b (OSJNBa0029H02.1protein) (OSJNBa0067K08.22 protein) | 3e-10 | At5g57815 | cytochrome c oxidase subunit 6b, putative | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
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