Co-expression analysis

Gene ID Zm.9568.1.A1_x_at
Gene name hypothetical protein LOC100191846
Homology with ArabidopsisSimilar to At3g03250: UGP (UDP-glucose pyrophosphorylase) (HF=6e-58)
Module size 6 genes
NF 0.22
%ile 17.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5775.10.97Zm.9568.1.A1_x_atCD435747hypothetical protein LOC100191846-6e-58At3g03250UGP (UDP-glucose pyrophosphorylase)O.I.H.G.S.X.
0.4455.70.97ZmAffx.579.1.A1_atAI714871--1e+1At5g15440EDL1 (EID1-like 1)O.I.H.G.S.X.
0.3538.90.97Zm.18451.1.A1_atCO532342hypothetical protein LOC100272357-1e-5At1g64710alcohol dehydrogenase, putativeO.I.H.G.S.X.
0.2622.70.96Zm.3632.1.S1_atCF627896KED-like protein /// cylicin-1-2e-1At3g05060SAR DNA-binding protein, putativeO.I.H.G.S.X.
0.115.30.97Zm.17519.1.A1_atBQ538711FIP1-1e-1At5g23370GRAM domain-containing protein / ABA-responsive protein-relatedO.I.H.G.S.X.
0.072.90.97Zm.12345.1.A1_atBM416967mediator complex subunit 10 CG5057-PA-2e-3At1g26665-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.793.2GSM205431Mo17 19 DAP endosperm tissue biological replicate 3GSE8278Non-additive and imprinted gene expression in hybrid maize endosperm_19DAPLink to GEO
2.793.2GSM205373Mo17 13 DAP endosperm tissue biological replicate 3GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAPLink to GEO
2.793.2GSM205424Mo17 19 DAP endosperm tissue biological replicate 2GSE8278Non-additive and imprinted gene expression in hybrid maize endosperm_19DAPLink to GEO
2.692.9GSM205369Mo17 13 DAP endosperm tissue biological replicate 2GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAPLink to GEO
2.692.9GSM205376B73xMo17 13 DAP endosperm tissue biological replicate 3GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAPLink to GEO
2.692.9GSM205365Mo17 13 DAP endosperm tissue biological replicate 1GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAPLink to GEO
2.692.9GSM205375Mo17xB73 13 DAP endosperm tissue biological replicate 3GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAPLink to GEO
2.592.6GSM202319Mo17 19 day after pollination embryo tissue, biological replicate 3GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo dataLink to GEO
2.492.2GSM205371Mo17xB73 13 DAP endosperm tissue biological replicate 2GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAPLink to GEO
2.391.7GSM205367Mo17xB73 13 DAP endosperm tissue biological replicate 1GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAPLink to GEO

Inter-species module comparison

A co-expression module including the rice gene, Os09g0553200, orthologous to the query gene, Zm.9568.1.A1_x_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9799.9Os09g0553200At3g03250-UTP--glucose-1-phosphate uridylyltransferase (EC2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase)9e-115At3g03250UGP (UDP-glucose pyrophosphorylase)O.I.H.G.S.X.
0.5676.3Os10g0478200At3g03250-Cytosolic malate dehydrogenase (EC 1.1.1.37)8e-44At5g43330malate dehydrogenase, cytosolic, putativeO.I.H.G.S.X.
0.4558.8Os05g0445500At3g03250-60S acidic ribosomal protein P2B4e-10At2g2772060S acidic ribosomal protein P2 (RPP2A)O.I.H.G.S.X.
0.3948.3Os03g0685500At3g03250-CHCH domain containing protein6e-22At5g64400-O.I.H.G.S.X.
0.3846.9Os02g0519900At3g03250-Elongation factor EF-2 (Fragment)0At1g56070LOS1O.I.H.G.S.X.
0.3745.0Os03g0177500At3g03250-EF-1 alpha0At1g07920elongation factor 1-alpha / EF-1-alphaO.I.H.G.S.X.
0.3644.0Os05g0155500At3g03250-Importin alpha 2 subunit (NLS receptor)2e-22At3g06720IMPA-1 (IMPORTIN ALPHA ISOFORM 1)O.I.H.G.S.X.
0.3440.0Os12g0567700At3g03250--5e-75At2g18020EMB2296 (embryo defective 2296)O.I.H.G.S.X.
0.3440.0Os03g0177400At3g03250-EF-1 alpha0At1g07920elongation factor 1-alpha / EF-1-alphaO.I.H.G.S.X.
0.3338.8Os02g0169300At3g03250-Phosphoglycerate kinase, cytosolic (EC 2.7.2.3)5e-67At1g79550PGK (PHOSPHOGLYCERATE KINASE)O.I.H.G.S.X.
0.3338.8Os08g0126300At3g03250-Glyceraldehyde-3-phosphate dehydrogenase(Fragment)6e-23At1g13440GAPC2 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C2)O.I.H.G.S.X.
0.2931.1Os03g0234200At3g03250-Ubiquitin fused to ribosomal protein L403e-45At3g52590UBQ1 (UBIQUITIN EXTENSION PROTEIN 1)O.I.H.G.S.X.
0.2321.2Os05g0350600At3g03250-Atranbp1b protein4e-8At1g07140SIRANBPO.I.H.G.S.X.
0.2117.9Os10g0411700At3g03250-Ribosomal protein S285e-3At3g1009040S ribosomal protein S28 (RPS28A)O.I.H.G.S.X.
0.1712.6Os03g0695600At3g03250-Proteasome subunit beta type 2 (EC 3.4.25.1) (20Sproteasome alpha subunit D) (20S proteasome subunitbeta-4)3e-3At3g22630PBD1 (20S PROTEASOME BETA SUBUNIT D1)O.I.H.G.S.X.
0.1510.3Os07g0691800At3g03250-26S proteasome subunit 4-like protein (26Sproteasome subunit AtRPT2a)7e-100At2g2014026S protease regulatory complex subunit 4, putativeO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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