Co-expression analysis

Gene ID Zm.9562.1.S1_at
Gene name aldehyde oxidase-2
Homology with ArabidopsisSimilar to At5g20960: AAO1 (ARABIDOPSIS ALDEHYDE OXIDASE 1) (HF=4e-5)
Module size 7 genes
NF 0.31
%ile 29.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8094.00.97Zm.9562.1.S1_atD88452.1aldehyde oxidase-2-4e-5At5g20960AAO1 (ARABIDOPSIS ALDEHYDE OXIDASE 1)O.I.H.G.S.X.
0.4658.40.97Zm.1249.1.S1_atBE575245hypothetical protein LOC100279729-1e+0At5g28180kelch repeat-containing F-box family proteinO.I.H.G.S.X.
0.3131.60.97Zm.1574.1.S1_atAY106519.1--6e-20At2g24320unknown proteinO.I.H.G.S.X.
0.2724.60.97Zm.16489.1.S1_atCF637893thiolase1-1e-12At5g48230ACAT2 (ACETOACETYL-COA THIOLASE 2)O.I.H.G.S.X.
0.2318.60.97Zm.4240.1.A1_atBM337929hypothetical protein LOC100191812-1e-1At5g47620heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putativeO.I.H.G.S.X.
0.2115.50.97Zm.9646.1.A1_atBM334563negatively light-regulated protein-5e+0At1g32700zinc-binding family proteinO.I.H.G.S.X.
0.169.40.97Zm.18885.1.A1_atCO530040hypothetical protein LOC100276818-3e+0At5g28780unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.298.6GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.398.4GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.998.3GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.098.2GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.898.1GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.398.0GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.997.9GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.697.6GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.597.1GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.294.5GSM253280ZM_8d_SG200_3Alu_IGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



Back to the CoP portal site

Back to the KAGIANA project homepage