Co-expression analysis

Gene ID	Zm.9557.1.A1_at
Gene name	Glycine cleavage H-protein
Homology with Arabidopsis	Similar to At1g32470: glycine cleavage system H protein, mitochondrial, putative (HF=2e-2)
Module size	20 genes
NF	0.29
%ile	25.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.95	99.6	0.90	Zm.9557.1.A1_at	BI423687	Glycine cleavage H-protein	-	2e-2	At1g32470	glycine cleavage system H protein, mitochondrial, putative	O.I.	H.G.	S.X.	Please select
0.45	56.4	0.91	ZmAffx.302.1.S1_at	AI670435	-	-	8e-1	At1g67090	RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A)	O.I.	H.G.	S.X.	Please select
0.42	51.3	0.95	Zm.9319.1.A1_at	CF627080	hypothetical protein LOC100216855	-	2e+0	At5g10000	ATFD4 (ferredoxin 4)	O.I.	H.G.	S.X.	Please select
0.33	36.0	0.94	Zm.10252.1.A1_at	AY108029.1	hypothetical protein LOC100279693	-	2e+0	At5g02750	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.33	36.0	0.95	Zm.12480.1.A1_at	AI901944	hypothetical protein LOC100194202	-	4e-1	At4g15393	CYP702A5	O.I.	H.G.	S.X.	Please select
0.32	33.4	0.96	Zm.12327.1.A1_at	BM380919	hypothetical protein LOC100279662	-	5e-11	At3g02990	ATHSFA1E	O.I.	H.G.	S.X.	Please select
0.32	33.4	0.92	Zm.17799.1.A1_at	CK371356	-	-	3e-1	At1g80890	unknown protein	O.I.	H.G.	S.X.	Please select
0.31	31.6	0.95	RPTR-Zm-J03196-1_at	RPTR-Zm-J03196-1	-	-			-	O.I.	H.G.	S.X.	Please select
0.27	24.6	0.95	ZmAffx.172.1.A1_at	AI668238	-	-	3e+0	Atmg00240	-	O.I.	H.G.	S.X.	Please select
0.27	24.6	0.92	ZmAffx.628.1.S1_at	AI715056	-	-	1e+1	At5g13340	unknown protein	O.I.	H.G.	S.X.	Please select
0.26	22.7	0.94	ZmAffx.1055.1.S1_at	AI881878	hypothetical protein LOC100279811	-	5e-2	At4g01940	NFU1	O.I.	H.G.	S.X.	Please select
0.26	22.7	0.90	ZmAffx.66.1.S1_at	AI665126	-	-	3e+0	At3g05460	sporozoite surface protein-related	O.I.	H.G.	S.X.	Please select
0.24	19.8	0.97	Zm.16475.3.A1_at	BQ704114	-	-	2e-7	At2g30260	U2B'' (U2 small nuclear ribonucleoprotein B)	O.I.	H.G.	S.X.	Please select
0.24	19.8	0.94	Zm.15671.1.A1_at	AI622439	-	-	4e-1	At5g20630	GER3 (GERMIN 3)	O.I.	H.G.	S.X.	Please select
0.23	18.6	0.95	Zm.8565.1.S1_at	CO528893	hypothetical protein LOC100279882	-	8e-7	At2g01110	APG2 (ALBINO AND PALE GREEN 2)	O.I.	H.G.	S.X.	Please select
0.23	18.6	0.95	ZmAffx.1056.1.A1_at	AI881906	-	-	3e+0	At1g31370	-	O.I.	H.G.	S.X.	Please select
0.23	18.6	0.95	Zm.11659.1.S1_s_at	BM379730	hypothetical protein LOC100274758	-	6e-2	At2g24550	unknown protein	O.I.	H.G.	S.X.	Please select
0.18	11.6	0.94	Zm.18082.1.S1_at	BQ486521	hypothetical protein LOC100277280	-	7e-1	At2g39440	-	O.I.	H.G.	S.X.	Please select
0.14	7.7	0.95	ZmAffx.1009.1.A1_at	AI881408	-	-	2e+0	At5g47320	RPS19 (RIBOSOMAL PROTEIN S19)	O.I.	H.G.	S.X.	Please select
0.13	6.8	0.92	Zm.16932.1.A1_s_at	AI737420	hypothetical protein LOC100191547	-	5e+0	At4g26410	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.9	97.3	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.0	96.7	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.9	96.7	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.9	96.7	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.8	96.6	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.7	96.5	GSM253281	ZM_8d_SG200_3Alu_II	GSE10023	Maize gene expression during infection with Ustilago maydis
4.7	96.5	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.7	96.5	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.5	96.3	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.2	96.0	GSM253280	ZM_8d_SG200_3Alu_I	GSE10023	Maize gene expression during infection with Ustilago maydis

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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