Co-expression analysis

Gene ID Zm.9482.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At5g50020: zinc finger (DHHC type) family protein (HF=5e+0)
Module size 9 genes
NF 0.36
%ile 37.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5369.10.97Zm.9482.1.A1_atBM269229--5e+0At5g50020zinc finger (DHHC type) family proteinO.I.H.G.S.X.
0.6077.80.98ZmAffx.842.1.S1_atAI770597--3e+0At3g15900unknown proteinO.I.H.G.S.X.
0.4658.40.98Zm.2226.1.A1_atBE129637structural molecule-5e-7At5g54110ATMAMI (ARABIDOPSIS THALIANA MEMBRANE-ASSOCIATED MANNITOL-INDUCED)O.I.H.G.S.X.
0.4048.50.98Zm.11594.1.S1_atBM379195hypothetical protein LOC100277981-2e+0At5g50175unknown proteinO.I.H.G.S.X.
0.3233.40.99Zm.13490.1.A1_atCD997217--4e-8At3g54670TTN8 (TITAN8)O.I.H.G.S.X.
0.3131.60.98Zm.16301.1.S1_atCK787019--5e+0At5g46730glycine-rich proteinO.I.H.G.S.X.
0.3029.80.98Zm.10485.1.S1_atBQ528490hypothetical protein LOC100193633-6e+0At3g03150unknown proteinO.I.H.G.S.X.
0.2318.60.98Zm.17157.1.A1_atBM074525--4e+0At5g22970unknown proteinO.I.H.G.S.X.
0.2216.90.98Zm.12287.1.A1_atCD568394glucan endo-1,3-beta-glucosidase 3-4e-8At1g18650PDCB3 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.799.0GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.298.6GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.498.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.697.9GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.497.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.397.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.397.4GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.997.3GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.897.2GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.995.7GSM320443protocol: mRNA - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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